Factsheet for GSMUA_Achr6P01610_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P01540_001	Banana	mitochondrion	95.35	90.44
TraesCS3A01G219200.1	Wheat	mitochondrion	71.71	74.3
TraesCS1B01G463000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	72.87	74.02
TraesCS1D01G437600.1	Wheat	plastid	72.48	73.62
GSMUA_Achr2P19690_001	Banana	plastid	73.26	73.54
TraesCS3B01G249600.2	Wheat	mitochondrion	71.71	73.41
TraesCS3D01G233300.1	Wheat	mitochondrion	71.71	73.41
TraesCS1A01G428100.1	Wheat	plastid	72.09	73.23
OQU78517	Sorghum	mitochondrion	71.32	72.44
KXG32884	Sorghum	plastid	69.77	72.29
Zm00001d009726_P002	Maize	mitochondrion	70.93	72.05
Os04t0174900-01	Rice	plastid	70.54	71.65
Zm00001d044460_P001	Maize	cytosol	68.22	71.54
Solyc06g067950.2.1	Tomato	plastid	70.93	71.48
PGSC0003DMT400073482	Potato	plastid	70.93	71.48
Bra027221.1-P	Field mustard	mitochondrion	67.83	70.56
PGSC0003DMT400073687	Potato	cytosol, nucleus, plastid	70.16	70.43
Solyc12g042890.1.1	Tomato	cytosol, nucleus, plastid	70.16	70.43
Os01t0612500-01	Rice	plastid	66.28	70.37
KRH23541	Soybean	cytosol, mitochondrion, plastid	69.38	69.92
KRH44416	Soybean	mitochondrion	68.99	69.53
CDX97691	Canola	plastid	68.22	69.02
Bra021124.1-P	Field mustard	plastid	68.22	69.02
CDY20140	Canola	mitochondrion, plastid	67.83	68.63
CDY72010	Canola	mitochondrion	52.71	68.34
CDY21856	Canola	plastid	67.44	68.24
CDY30093	Canola	plastid	67.05	67.84
AT1G52700.2	Thale cress	cytosol, mitochondrion, nucleus, plastid	67.05	67.84
CDY58459	Canola	plastid	66.67	67.45
Bra030973.1-P	Field mustard	cytosol, mitochondrion, plastid	66.67	67.45
CDY60557	Canola	plastid	66.28	67.06
CDY02538	Canola	mitochondrion	66.28	67.06
Bra001602.1-P	Field mustard	endoplasmic reticulum, extracellular	67.05	64.55
Bra030370.1-P	Field mustard	extracellular	65.5	64.26
AT3G15650.2	Thale cress	plastid	68.22	64.23
KRH47496	Soybean	plastid	67.44	64.21
CDX75839	Canola	plasma membrane	66.28	63.81
VIT_09s0002g06010.t01	Wine grape	extracellular	72.09	63.7
KRH09772	Soybean	plastid	68.6	60.62
HORVU6Hr1G043710.1	Barley	cytosol, extracellular, mitochondrion, plastid	27.52	59.17
CDY62011	Canola	endoplasmic reticulum, plasma membrane	65.89	58.02
HORVU1Hr1G093460.5	Barley	cytosol, plastid	67.44	55.77
Os05t0588100-00	Rice	cytosol	60.08	54.58
TraesCS3B01G193000.1	Wheat	extracellular, peroxisome	25.19	51.18
GSMUA_Achr10P...	Banana	extracellular	61.24	48.77
GSMUA_Achr10P...	Banana	cytosol	17.05	47.83
HORVU7Hr1G061760.2	Barley	mitochondrion	37.21	45.5
CDY28985	Canola	extracellular	18.22	43.93
GSMUA_Achr1P09700_001	Banana	plastid	23.26	27.91

Protein Annotations

EnsemblPlants:GSMUA_Achr6P01610_001	EnsemblPlants:GSMUA_Achr6T01610_001	EnsemblPlantsGene:GSMUA_Achr6G01610_001	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:AB_hydrolase	InterPro:IPR029058	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF34
PFAM:PF02230	SEG:seg	SUPFAM:SSF53474	UniParc:UPI000296E5EB	UniProt:M0T3A9	MapMan:35.1

Description

Putative Acyl-protein thioesterase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G01610_001]

Coordinates

chr6:-:1034072..1036326

Molecular Weight (calculated)

27795.9 Da

IEP (calculated)

9.120

GRAVY (calculated)

-0.258

Length

258 amino acids

Sequence
(BLAST)

001: MYRGGSSYAS GSRSATRRHV DYGRTYVVRP KGRHRATIVW LHGLGDNGAS WYQLLETLPL PNIKWICPTA PTRPVALFGG FPCTAWFDVA DPSQDGPDDA
101: DGLEASAAHI ANLLSSEPAD VKLGIGGFSM GAATALYSAS CFAHGRYGNG GRYPINLSAV VGLSGWLPCS RSLKTKVESS QEAARRAASL PLLLCHGTGD
201: GVVPYKQGER SAETLRMSGF RNLTFKAYNG LEHYTIPEEM DAVSKWLTAR LRLDGSRA

Best Arabidopsis Sequence Match ( AT5G20060.1 )
(BLAST)

001: MSISGAAVGS GRNLRRAVEF GKTHVVRPKG KHQATIVWLH GLGDNGSSWS QLLETLPLPN IKWICPTAPS QPISLFGGFP STAWFDVVDI NEDGPDDMEG
101: LDVAAAHVAN LLSNEPADIK LGVGGFSMGA ATSLYSATCF ALGKYGNGNP YPINLSAIIG LSGWLPCAKT LAGKLEEEQI KNRAASLPIV VCHGKADDVV
201: PFKFGEKSSQ ALLSNGFKKV TFKPYSALGH HTIPQELDEL CAWLTSTLSL EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L9X1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.