Factsheet for VIT_09s0002g06010.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073482	Potato	plastid	73.29	83.59
Solyc06g067950.2.1	Tomato	plastid	73.29	83.59
PGSC0003DMT400073687	Potato	cytosol, nucleus, plastid	72.6	82.49
Solyc12g042890.1.1	Tomato	cytosol, nucleus, plastid	72.6	82.49
KRH23541	Soybean	cytosol, mitochondrion, plastid	70.89	80.86
KRH44416	Soybean	mitochondrion	69.86	79.69
VIT_04s0008g05120.t01	Wine grape	plastid	68.15	77.43
CDY72010	Canola	mitochondrion	52.05	76.38
Bra027221.1-P	Field mustard	mitochondrion	64.73	76.21
KRH09772	Soybean	plastid	76.03	76.03
Bra021124.1-P	Field mustard	plastid	66.1	75.69
CDX97691	Canola	plastid	66.1	75.69
CDY58459	Canola	plastid	66.1	75.69
CDY20140	Canola	mitochondrion, plastid	65.75	75.29
AT1G52700.2	Thale cress	cytosol, mitochondrion, nucleus, plastid	65.41	74.9
CDY60557	Canola	plastid	65.41	74.9
CDY21856	Canola	plastid	65.41	74.9
CDY30093	Canola	plastid	65.07	74.51
Bra030973.1-P	Field mustard	cytosol, mitochondrion, plastid	65.07	74.51
CDY02538	Canola	mitochondrion	64.73	74.12
VIT_11s0016g04850.t01	Wine grape	plastid	64.38	73.44
KRH47496	Soybean	plastid	68.15	73.43
GSMUA_Achr6P01610_001	Banana	plastid	63.7	72.09
Bra001602.1-P	Field mustard	endoplasmic reticulum, extracellular	66.1	72.01
CDX75839	Canola	plasma membrane	64.73	70.52
AT3G15650.2	Thale cress	plastid	65.75	70.07
Bra030370.1-P	Field mustard	extracellular	63.01	69.96
TraesCS1D01G437600.1	Wheat	plastid	60.62	69.69
TraesCS1B01G463000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	60.62	69.69
TraesCS1A01G428100.1	Wheat	plastid	60.27	69.29
KXG32884	Sorghum	plastid	58.9	69.08
TraesCS3A01G219200.1	Wheat	mitochondrion	58.9	69.08
TraesCS3D01G233300.1	Wheat	mitochondrion	58.9	68.25
TraesCS3B01G249600.2	Wheat	mitochondrion	58.9	68.25
Zm00001d044460_P001	Maize	cytosol	57.19	67.89
OQU78517	Sorghum	mitochondrion	58.9	67.72
Os04t0174900-01	Rice	plastid	58.56	67.32
Zm00001d009726_P002	Maize	mitochondrion	58.56	67.32
GSMUA_Achr6P01540_001	Banana	mitochondrion	61.3	65.81
CDY62011	Canola	endoplasmic reticulum, plasma membrane	65.41	65.19
Os01t0612500-01	Rice	plastid	53.77	64.61
HORVU6Hr1G043710.1	Barley	cytosol, extracellular, mitochondrion, plastid	22.95	55.83
HORVU1Hr1G093460.5	Barley	cytosol, plastid	56.85	53.21
Os05t0588100-00	Rice	cytosol	50.68	52.11
HORVU7Hr1G061760.2	Barley	mitochondrion	33.9	46.92
TraesCS3B01G193000.1	Wheat	extracellular, peroxisome	18.84	43.31
VIT_00s0612g00010.t01	Wine grape	cytosol	15.07	25.43
VIT_00s0515g00010.t01	Wine grape	cytosol	23.29	14.35

Protein Annotations

EntrezGene:100246445	wikigene:100246445	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	ProteinID:CBI36259
ProteinID:CBI36259.3	UniProt:D7U0W3	EMBL:FN596494	GO:GO:0002084	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008474	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	GO:GO:0052689	InterPro:IPR029058	EntrezGene:LOC100246445	wikigene:LOC100246445
PFAM:PF02230	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF34	MEROPS:S09.A56	SUPFAM:SSF53474
TMHMM:TMhelix	UniParc:UPI0001BE4A2C	ArrayExpress:VIT_09s0002g06010	EnsemblPlantsGene:VIT_09s0002g06010	EnsemblPlants:VIT_09s0002g06010.t01	unigene:Vvi.20670
RefSeq:XP_002285335	RefSeq:XP_002285335.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr9:+:5826003..5831423

Molecular Weight (calculated)

31393.5 Da

IEP (calculated)

7.787

GRAVY (calculated)

0.002

Length

292 amino acids

Sequence
(BLAST)

001: MNVLCSALIL SAQKIYLFIF ITIGGLFTAL ARSVTMSYSN HSMGSGSRTA RRTFEFGRTH VVRPKGKHQA TIVWLHGLGD NGSSWSQLLE NLPLPNIKWI
101: CPTAPTRPVA VLGGFPCTAW FDVGELSDDG PDDLDGLDAS AAHIANLLST EPADVKLGVG GFSMGAATAL YSATCYAQAK YGNNSPYPVN LKAVVGLSGW
201: LPGSRSLRNK IEGSHEAARR AASLPIMLCH GMNDDVVAYN YGERSAHCLS SAGFRYLTFK AYDGLGHYTV PKEMDEVCTW LTARLGLEGC HS

Best Arabidopsis Sequence Match ( AT1G52700.2 )
(BLAST)

001: MSYSHQSMGS GSRNARGYEF GRTYVVRPKG KHQATLVWLH GLGDNGSSSS QLMDSLHLPN IKWICPTAPS RPVTSLGGFT CTAWFDVGEI SEDGHDDLEG
101: LDASASHIAN LLSSEPADVK VGIGGFSMGA AISLYSATCY ALGRYGTGHA YPINLQAVVG LSGWLPGWKS LRSKIECSFE AARRAASLPI ILTHGTSDDV
201: VPYRFGEKSA QSLGMAGFRL AMFKPYEGLG HYTVPREMDE VVHWLTTMLG LEGSR

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQT5]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.