CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 1
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009726_P002	Maize	mitochondrion	94.88	94.88
TraesCS1A01G428100.1	Wheat	plastid	87.4	87.4
TraesCS1D01G437600.1	Wheat	plastid	87.01	87.01
TraesCS1B01G463000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	86.61	86.61
Os04t0174900-01	Rice	plastid	85.43	85.43
KXG32884	Sorghum	plastid	79.92	81.53
GSMUA_Achr6P01610_001	Banana	plastid	72.44	71.32
HORVU6Hr1G043710.1	Barley	cytosol, extracellular, mitochondrion, plastid	32.68	69.17
Bra027221.1-P	Field mustard	mitochondrion	66.14	67.74
Solyc06g067950.2.1	Tomato	plastid	67.72	67.19
PGSC0003DMT400073482	Potato	plastid	67.72	67.19
CDX97691	Canola	plastid	67.32	67.06
CDY58459	Canola	plastid	67.32	67.06
CDY20140	Canola	mitochondrion, plastid	66.54	66.27
CDY30093	Canola	plastid	66.54	66.27
Bra021124.1-P	Field mustard	plastid	66.54	66.27
PGSC0003DMT400073687	Potato	cytosol, nucleus, plastid	66.93	66.15
Solyc12g042890.1.1	Tomato	cytosol, nucleus, plastid	66.93	66.15
KRH23541	Soybean	cytosol, mitochondrion, plastid	66.54	66.02
AT1G52700.2	Thale cress	cytosol, mitochondrion, nucleus, plastid	66.14	65.88
CDY21856	Canola	plastid	65.75	65.49
HORVU1Hr1G093460.5	Barley	cytosol, plastid	80.31	65.38
KRH44416	Soybean	mitochondrion	65.75	65.23
CDY72010	Canola	mitochondrion	50.79	64.82
GSMUA_Achr6P01540_001	Banana	mitochondrion	69.29	64.71
KXG31735	Sorghum	plastid	64.57	64.31
Bra001602.1-P	Field mustard	endoplasmic reticulum, extracellular	67.72	64.18
Bra030973.1-P	Field mustard	cytosol, mitochondrion, plastid	63.39	63.14
CDY02538	Canola	mitochondrion	63.39	63.14
CDY60557	Canola	plastid	63.39	63.14
CDX75839	Canola	plasma membrane	66.14	62.69
AT3G15650.2	Thale cress	plastid	67.32	62.41
Os05t0588100-00	Rice	cytosol	68.5	61.27
KRH47496	Soybean	plastid	64.57	60.52
Bra030370.1-P	Field mustard	extracellular	61.81	59.7
VIT_09s0002g06010.t01	Wine grape	extracellular	67.72	58.9
KRH09772	Soybean	plastid	66.14	57.53
HORVU7Hr1G061760.2	Barley	mitochondrion	47.64	57.35
CDY62011	Canola	endoplasmic reticulum, plasma membrane	62.99	54.61
CDY28985	Canola	extracellular	18.9	44.86
OQU82541	Sorghum	plastid	22.44	12.69

Protein Annotations

EnsemblPlants:OQU78517	EnsemblPlantsGene:SORBI_3009G251400	EntrezGene:8065302	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:AB_hydrolase	InterPro:IPR029058	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF54
PFAM:PF02230	ProteinID:OQU78517	ProteinID:OQU78517.1	RefSeq:XP_002441605.1	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0001A893C6	UniProt:A0A1Z5R441	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:58637983..58645722

Molecular Weight (calculated)

27448.6 Da

IEP (calculated)

8.469

GRAVY (calculated)

-0.080

Length

254 amino acids

Sequence
(BLAST)

001: MSYYGSSSSG GRSSRRVDYG RTYVVRPKGR HLATFVWLHG LGDNGASWSQ LLDSLPLPNI KWICPTAASR PVAAFGGFPC TAWFDVEDTS IDGRDDIEGL
101: DASAAHIANL LSSEPSDVKL GIGGFSMGAA VALHSAACYA QGKFTSGIPY PITLNAVISL SGWLPCSRTL RSKMESSHIA IRRAASLPIL LGHGRVDEVV
201: VYRNGERSAE ILRNSGFSFL TFKPYNGLGH YTIPEEMDDL CKWLSSSLGL SRSR

Best Arabidopsis Sequence Match ( AT5G20060.1 )
(BLAST)

001: MSISGAAVGS GRNLRRAVEF GKTHVVRPKG KHQATIVWLH GLGDNGSSWS QLLETLPLPN IKWICPTAPS QPISLFGGFP STAWFDVVDI NEDGPDDMEG
101: LDVAAAHVAN LLSNEPADIK LGVGGFSMGA ATSLYSATCF ALGKYGNGNP YPINLSAIIG LSGWLPCAKT LAGKLEEEQI KNRAASLPIV VCHGKADDVV
201: PFKFGEKSSQ ALLSNGFKKV TFKPYSALGH HTIPQELDEL CAWLTSTLSL EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L9X1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.