Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030370.1-P | Field mustard | extracellular | 88.74 | 98.86 |
| CDY60557 | Canola | plastid | 86.01 | 98.82 |
| CDY72010 | Canola | mitochondrion | 63.82 | 93.97 |
| AT1G52700.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 80.55 | 92.55 |
| CDY02538 | Canola | mitochondrion | 80.55 | 92.55 |
| CDX97691 | Canola | plastid | 73.72 | 84.71 |
| CDY58459 | Canola | plastid | 73.04 | 83.92 |
| CDY30093 | Canola | plastid | 72.7 | 83.53 |
| CDY20140 | Canola | mitochondrion, plastid | 71.67 | 82.35 |
| CDY21856 | Canola | plastid | 71.33 | 81.96 |
| CDX75839 | Canola | plasma membrane | 72.35 | 79.1 |
| KRH44416 | Soybean | mitochondrion | 65.87 | 75.39 |
| KRH23541 | Soybean | cytosol, mitochondrion, plastid | 65.53 | 75.0 |
| PGSC0003DMT400073687 | Potato | cytosol, nucleus, plastid | 64.16 | 73.15 |
| Solyc12g042890.1.1 | Tomato | cytosol, nucleus, plastid | 64.16 | 73.15 |
| PGSC0003DMT400073482 | Potato | plastid | 63.14 | 72.27 |
| Solyc06g067950.2.1 | Tomato | plastid | 63.14 | 72.27 |
| KRH47496 | Soybean | plastid | 64.51 | 69.74 |
| GSMUA_Achr6P01610_001 | Banana | plastid | 58.02 | 65.89 |
| KXG32884 | Sorghum | plastid | 55.97 | 65.86 |
| KRH09772 | Soybean | plastid | 65.53 | 65.75 |
| VIT_09s0002g06010.t01 | Wine grape | extracellular | 65.19 | 65.41 |
| Zm00001d044460_P001 | Maize | cytosol | 54.27 | 64.63 |
| TraesCS1D01G437600.1 | Wheat | plastid | 55.29 | 63.78 |
| TraesCS1B01G463000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 55.29 | 63.78 |
| TraesCS1A01G428100.1 | Wheat | plastid | 54.95 | 63.39 |
| Os04t0174900-01 | Rice | plastid | 54.61 | 62.99 |
| OQU78517 | Sorghum | mitochondrion | 54.61 | 62.99 |
| Zm00001d009726_P002 | Maize | mitochondrion | 54.61 | 62.99 |
| TraesCS3A01G219200.1 | Wheat | mitochondrion | 52.56 | 61.85 |
| Os01t0612500-01 | Rice | plastid | 50.85 | 61.32 |
| TraesCS3D01G233300.1 | Wheat | mitochondrion | 52.56 | 61.11 |
| TraesCS3B01G249600.2 | Wheat | mitochondrion | 52.56 | 61.11 |
| GSMUA_Achr6P01540_001 | Banana | mitochondrion | 56.31 | 60.66 |
| HORVU6Hr1G043710.1 | Barley | cytosol, extracellular, mitochondrion, plastid | 22.18 | 54.17 |
| Os05t0588100-00 | Rice | cytosol | 48.46 | 50.0 |
| CDY28985 | Canola | extracellular | 18.09 | 49.53 |
| HORVU1Hr1G093460.5 | Barley | cytosol, plastid | 52.22 | 49.04 |
| HORVU7Hr1G061760.2 | Barley | mitochondrion | 32.08 | 44.55 |
| TraesCS3B01G193000.1 | Wheat | extracellular, peroxisome | 18.77 | 43.31 |
| CDY08787 | Canola | cytosol, plasma membrane, plastid | 34.13 | 41.84 |
| CDY68953 | Canola | cytosol | 29.35 | 41.75 |
| CDY14573 | Canola | cytosol, extracellular, plasma membrane | 35.15 | 40.08 |
| CDY49908 | Canola | cytosol | 23.55 | 30.8 |
| CDX94091 | Canola | mitochondrion | 24.23 | 29.58 |
| CDX87910 | Canola | extracellular | 25.94 | 28.46 |
| CDX94090 | Canola | extracellular, vacuole | 23.21 | 25.95 |
| CDX98742 | Canola | mitochondrion, vacuole | 24.91 | 14.6 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.1 | GO:A0A078JCK3 | UniProt:A0A078JCK3 | InterPro:AB_hydrolase | EnsemblPlants:CDY62011 |
| ProteinID:CDY62011 | ProteinID:CDY62011.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00035829001 | InterPro:IPR029058 | PFAM:PF02230 | InterPro:PLipase/COase/thioEstase |
| PANTHER:PTHR10655 | PANTHER:PTHR10655:SF34 | SUPFAM:SSF53474 | TMHMM:TMhelix | UniParc:UPI0004EEFFDE | SEG:seg |
Description
BnaCnng38960DBnaCnng38960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCK3]
Coordinates
chrLK034079:+:8579..10911
Molecular Weight (calculated)
31912.5 Da
IEP (calculated)
7.616
GRAVY (calculated)
0.092
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYSHQSMGS GLFSPFLIIV HVICFLEILV MLLMIKFISK IISIEIILGS RNARGYEFGR TYVVRPKGKH QATLVWLHGL GDNGSSSSQL MESLHLPNIK
101: WICPTAPTRP VSSLGGYTCT AWFDVGEISE DSHDDLEGLD ASASHIANLL SSEPADVKVG IGGFSMGGAI SLYSATCYAL GRYGTGHTYP INLRAVVGLS
201: GWLPGWKSLR NKIECSYEAA RRAASLPIIL THGTADDLVP YRFGEKSAQS LGIAGFRQAV FKPYEGLGHY TVPKELDEVV QWLTTRLGLE GSR
101: WICPTAPTRP VSSLGGYTCT AWFDVGEISE DSHDDLEGLD ASASHIANLL SSEPADVKVG IGGFSMGGAI SLYSATCYAL GRYGTGHTYP INLRAVVGLS
201: GWLPGWKSLR NKIECSYEAA RRAASLPIIL THGTADDLVP YRFGEKSAQS LGIAGFRQAV FKPYEGLGHY TVPKELDEVV QWLTTRLGLE GSR
001: MSYSHQSMGS GSRNARGYEF GRTYVVRPKG KHQATLVWLH GLGDNGSSSS QLMDSLHLPN IKWICPTAPS RPVTSLGGFT CTAWFDVGEI SEDGHDDLEG
101: LDASASHIAN LLSSEPADVK VGIGGFSMGA AISLYSATCY ALGRYGTGHA YPINLQAVVG LSGWLPGWKS LRSKIECSFE AARRAASLPI ILTHGTSDDV
201: VPYRFGEKSA QSLGMAGFRL AMFKPYEGLG HYTVPREMDE VVHWLTTMLG LEGSR
101: LDASASHIAN LLSSEPADVK VGIGGFSMGA AISLYSATCY ALGRYGTGHA YPINLQAVVG LSGWLPGWKS LRSKIECSFE AARRAASLPI ILTHGTSDDV
201: VPYRFGEKSA QSLGMAGFRL AMFKPYEGLG HYTVPREMDE VVHWLTTMLG LEGSR
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQT5]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.