Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49908 | Canola | cytosol | 76.03 | 90.62 |
| AT1G52460.1 | Thale cress | cytosol | 35.21 | 40.87 |
| AT1G52440.1 | Thale cress | cytosol | 29.59 | 39.5 |
| AT1G52470.1 | Thale cress | cytosol | 32.96 | 37.45 |
| CDY68953 | Canola | cytosol | 27.72 | 35.92 |
| CDY72010 | Canola | mitochondrion | 23.97 | 32.16 |
| CDX97691 | Canola | plastid | 29.59 | 30.98 |
| CDY58459 | Canola | plastid | 29.59 | 30.98 |
| CDY30093 | Canola | plastid | 29.21 | 30.59 |
| CDY20140 | Canola | mitochondrion, plastid | 28.84 | 30.2 |
| CDY21856 | Canola | plastid | 28.84 | 30.2 |
| CDY60557 | Canola | plastid | 28.84 | 30.2 |
| CDY08787 | Canola | cytosol, plasma membrane, plastid | 26.97 | 30.13 |
| CDY02538 | Canola | mitochondrion | 28.46 | 29.8 |
| CDY14573 | Canola | cytosol, extracellular, plasma membrane | 28.46 | 29.57 |
| CDX75839 | Canola | plasma membrane | 29.21 | 29.1 |
| CDY62011 | Canola | endoplasmic reticulum, plasma membrane | 28.46 | 25.94 |
| CDY28985 | Canola | extracellular | 8.61 | 21.5 |
| CDX94090 | Canola | extracellular, vacuole | 13.11 | 13.36 |
| CDX94091 | Canola | mitochondrion | 11.98 | 13.33 |
| CDX98742 | Canola | mitochondrion, vacuole | 12.73 | 6.8 |
Protein Annotations
| EnsemblPlants:CDX87910 | EnsemblPlantsGene:GSBRNA2T00147163001 | Gene3D:3.40.50.1820 | GO:A0A078DF88 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF55 |
| PFAM:PF02230 | ProteinID:CDX87910 | ProteinID:CDX87910.1 | SEG:seg | SUPFAM:SSF53474 | UniParc:UPI0004EE4C59 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC06g09720D
Coordinates
chrLK031852:+:1445676..1447846
Molecular Weight (calculated)
29474.5 Da
IEP (calculated)
6.352
GRAVY (calculated)
0.140
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLFVIFVKM WNIYYSKTFC LSINISVAKI SAGSSSNSIG TEDGYVLEPQ GEHRVTIVWL HDVHENSYIS LQIVRSLNLR NIKWICLDSG THVDVFSPGG
101: GVPRNSWCNV GMITDTTQDC RDELDSAAVR VANILSTEPE NVIKGVGGVG QGAQVALNFA KWNAVGDHTM NMRLVIGINS WRIPTNRIDY AFGAAIRASW
201: QSILLIRGNL EPSIPLYFAK ETAVSLIDDG FGEVSFVQFR MLGPEITVSV LKKVEVWLSG KLPLDPN
101: GVPRNSWCNV GMITDTTQDC RDELDSAAVR VANILSTEPE NVIKGVGGVG QGAQVALNFA KWNAVGDHTM NMRLVIGINS WRIPTNRIDY AFGAAIRASW
201: QSILLIRGNL EPSIPLYFAK ETAVSLIDDG FGEVSFVQFR MLGPEITVSV LKKVEVWLSG KLPLDPN
001: MAASSSRNGA NVLDLKCSHF VEPQGDQRAS IVWLHDKDEH FTDSVQFVKS LKLKNVNWIC PPIVYTNTSY DFGSNIKQDD REALDSAAKF VADLLLREPL
101: NVVKGVGGFG MGAVVALQFA TNCALGHYPI NPRVVVGING WLSITGSITS SIEYTVGAVA RAASQKIFFT RGAENRLLPY TREEEVVESL REAGFGDVFF
201: LIYSWLRHEH HLDIRDMLKL WLELSLPITK TSPLR
101: NVVKGVGGFG MGAVVALQFA TNCALGHYPI NPRVVVGING WLSITGSITS SIEYTVGAVA RAASQKIFFT RGAENRLLPY TREEEVVESL REAGFGDVFF
201: LIYSWLRHEH HLDIRDMLKL WLELSLPITK TSPLR
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SSQ1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.