Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58459 | Canola | plastid | 90.67 | 95.29 |
| CDX97691 | Canola | plastid | 88.81 | 93.33 |
| CDY30093 | Canola | plastid | 88.43 | 92.94 |
| CDY20140 | Canola | mitochondrion, plastid | 87.69 | 92.16 |
| CDY21856 | Canola | plastid | 86.94 | 91.37 |
| AT3G15650.2 | Thale cress | plastid | 87.69 | 85.77 |
| CDY60557 | Canola | plastid | 79.85 | 83.92 |
| CDY72010 | Canola | mitochondrion | 61.57 | 82.91 |
| CDY02538 | Canola | mitochondrion | 78.73 | 82.75 |
| KRH23541 | Soybean | cytosol, mitochondrion, plastid | 73.51 | 76.95 |
| KRH44416 | Soybean | mitochondrion | 72.01 | 75.39 |
| CDY62011 | Canola | endoplasmic reticulum, plasma membrane | 79.1 | 72.35 |
| Solyc06g067950.2.1 | Tomato | plastid | 69.03 | 72.27 |
| PGSC0003DMT400073482 | Potato | plastid | 68.66 | 71.88 |
| PGSC0003DMT400073687 | Potato | cytosol, nucleus, plastid | 68.66 | 71.6 |
| Solyc12g042890.1.1 | Tomato | cytosol, nucleus, plastid | 68.66 | 71.6 |
| KRH47496 | Soybean | plastid | 70.9 | 70.11 |
| KRH09772 | Soybean | plastid | 73.13 | 67.12 |
| KXG32884 | Sorghum | plastid | 62.31 | 67.07 |
| GSMUA_Achr6P01610_001 | Banana | plastid | 63.81 | 66.28 |
| Zm00001d044460_P001 | Maize | cytosol | 60.82 | 66.26 |
| OQU78517 | Sorghum | mitochondrion | 62.69 | 66.14 |
| TraesCS1B01G463000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 61.94 | 65.35 |
| TraesCS1D01G437600.1 | Wheat | plastid | 61.94 | 65.35 |
| Os04t0174900-01 | Rice | plastid | 61.57 | 64.96 |
| TraesCS1A01G428100.1 | Wheat | plastid | 61.57 | 64.96 |
| Zm00001d009726_P002 | Maize | mitochondrion | 61.57 | 64.96 |
| VIT_09s0002g06010.t01 | Wine grape | extracellular | 70.52 | 64.73 |
| TraesCS3A01G219200.1 | Wheat | mitochondrion | 58.96 | 63.45 |
| TraesCS3B01G249600.2 | Wheat | mitochondrion | 58.96 | 62.7 |
| TraesCS3D01G233300.1 | Wheat | mitochondrion | 58.96 | 62.7 |
| Os01t0612500-01 | Rice | plastid | 56.72 | 62.55 |
| GSMUA_Achr6P01540_001 | Banana | mitochondrion | 61.57 | 60.66 |
| HORVU6Hr1G043710.1 | Barley | cytosol, extracellular, mitochondrion, plastid | 23.51 | 52.5 |
| CDY28985 | Canola | extracellular | 20.9 | 52.34 |
| Os05t0588100-00 | Rice | cytosol | 52.99 | 50.0 |
| HORVU1Hr1G093460.5 | Barley | cytosol, plastid | 57.84 | 49.68 |
| HORVU7Hr1G061760.2 | Barley | mitochondrion | 34.7 | 44.08 |
| TraesCS3B01G193000.1 | Wheat | extracellular, peroxisome | 20.15 | 42.52 |
| CDY68953 | Canola | cytosol | 32.46 | 42.23 |
| CDY08787 | Canola | cytosol, plasma membrane, plastid | 35.07 | 39.33 |
| CDY14573 | Canola | cytosol, extracellular, plasma membrane | 36.19 | 37.74 |
| CDY49908 | Canola | cytosol | 26.12 | 31.25 |
| CDX87910 | Canola | extracellular | 29.1 | 29.21 |
| CDX94091 | Canola | mitochondrion | 24.63 | 27.5 |
| CDX94090 | Canola | extracellular, vacuole | 23.51 | 24.05 |
| CDX98742 | Canola | mitochondrion, vacuole | 25.37 | 13.6 |
Protein Annotations
| EnsemblPlants:CDX75839 | EnsemblPlantsGene:GSBRNA2T00123808001 | Gene3D:3.40.50.1820 | GO:A0A078CID9 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF34 |
| PFAM:PF02230 | ProteinID:CDX75839 | ProteinID:CDX75839.1 | SignalP:SignalP-noTM | SUPFAM:SSF53474 | UniParc:UPI0004EDBFBF |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC03g39220D
Coordinates
chrLK031805:+:1051369..1053055
Molecular Weight (calculated)
29061.7 Da
IEP (calculated)
7.933
GRAVY (calculated)
-0.073
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYSHQNMGS GLFLPLICPV FTVGCRSARG YEFGRTYVVR PKGKHQATIV WLHGLGDNGS SSSQLLESLP FPNIKWICPT APSRPVSLLG GFPCTAWFDV
101: GEISEDLHDD IEGLDASAAH IANLLSTEPT DVKVGIGGFS MGAAIALYST TCYALGRYGT GQPYTINLRA TVGLSGWLPG WRRLRSKIER SNEATRRAAS
201: IPIILAHGTS DDVVPYSFGE KSAHSLGMAG FRQVVFKPYE GLGHYTVPKE MEEVVHWLAS RLGLDGSR
101: GEISEDLHDD IEGLDASAAH IANLLSTEPT DVKVGIGGFS MGAAIALYST TCYALGRYGT GQPYTINLRA TVGLSGWLPG WRRLRSKIER SNEATRRAAS
201: IPIILAHGTS DDVVPYSFGE KSAHSLGMAG FRQVVFKPYE GLGHYTVPKE MEEVVHWLAS RLGLDGSR
001: MSYSRQSMGS GLFLTYLFGS CSRSTRGYEF GRTYVVRPKG KHQATIVWLH GLGDNGSSSS QLLESLPLPN IKWICPTAPS RPVSLLGGFP CTAWFDVGEI
101: SEDLHDDIEG LDASAAHIAN LLSAEPTDVK VGIGGFSMGA AIALYSTTCY ALGRYGTGHA YTINLRATVG LSGWLPGWRS LRSKIESSNE VARRAASIPI
201: LLAHGTSDDV VPYRFGEKSA HSLAMAGFRQ TMFKPYEGLG HYTVPKEMDE VVHWLVSRLG LEGSR
101: SEDLHDDIEG LDASAAHIAN LLSAEPTDVK VGIGGFSMGA AIALYSTTCY ALGRYGTGHA YTINLRATVG LSGWLPGWRS LRSKIESSNE VARRAASIPI
201: LLAHGTSDDV VPYRFGEKSA HSLAMAGFRQ TMFKPYEGLG HYTVPKEMDE VVHWLVSRLG LEGSR
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J010]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.