CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20140	Canola	mitochondrion, plastid	98.43	98.43
Bra021124.1-P	Field mustard	plastid	98.04	98.04
CDY58459	Canola	plastid	93.33	93.33
CDX97691	Canola	plastid	92.94	92.94
CDY30093	Canola	plastid	92.55	92.55
CDX75839	Canola	plasma membrane	91.37	86.94
AT3G15650.2	Thale cress	plastid	92.55	86.13
CDY60557	Canola	plastid	83.14	83.14
CDY02538	Canola	mitochondrion	83.14	83.14
CDY72010	Canola	mitochondrion	64.71	82.91
KRH23541	Soybean	cytosol, mitochondrion, plastid	76.08	75.78
KRH44416	Soybean	mitochondrion	75.69	75.39
Solyc06g067950.2.1	Tomato	plastid	73.33	73.05
PGSC0003DMT400073687	Potato	cytosol, nucleus, plastid	73.33	72.76
Solyc12g042890.1.1	Tomato	cytosol, nucleus, plastid	73.33	72.76
PGSC0003DMT400073482	Potato	plastid	72.94	72.66
CDY62011	Canola	endoplasmic reticulum, plasma membrane	81.96	71.33
KRH47496	Soybean	plastid	74.51	70.11
KXG32884	Sorghum	plastid	66.27	67.87
GSMUA_Achr6P01610_001	Banana	plastid	68.24	67.44
Zm00001d044460_P001	Maize	cytosol	64.71	67.07
KRH09772	Soybean	plastid	76.47	66.78
Os04t0174900-01	Rice	plastid	66.27	66.54
TraesCS1D01G437600.1	Wheat	plastid	65.49	65.75
TraesCS1B01G463000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	65.49	65.75
OQU78517	Sorghum	mitochondrion	65.49	65.75
VIT_09s0002g06010.t01	Wine grape	extracellular	74.9	65.41
TraesCS1A01G428100.1	Wheat	plastid	65.1	65.35
TraesCS3A01G219200.1	Wheat	mitochondrion	62.75	64.26
Zm00001d009726_P002	Maize	mitochondrion	63.92	64.17
TraesCS3B01G249600.2	Wheat	mitochondrion	62.75	63.49
TraesCS3D01G233300.1	Wheat	mitochondrion	62.35	63.1
Os01t0612500-01	Rice	plastid	60.0	62.96
GSMUA_Achr6P01540_001	Banana	mitochondrion	65.88	61.76
HORVU6Hr1G043710.1	Barley	cytosol, extracellular, mitochondrion, plastid	25.49	54.17
CDY28985	Canola	extracellular	21.57	51.4
HORVU1Hr1G093460.5	Barley	cytosol, plastid	61.57	50.32
Os05t0588100-00	Rice	cytosol	55.69	50.0
TraesCS3B01G193000.1	Wheat	extracellular, peroxisome	21.96	44.09
HORVU7Hr1G061760.2	Barley	mitochondrion	36.47	44.08
CDY68953	Canola	cytosol	33.73	41.75
CDY08787	Canola	cytosol, plasma membrane, plastid	37.25	39.75
CDY14573	Canola	cytosol, extracellular, plasma membrane	38.43	38.13
CDY49908	Canola	cytosol	27.06	30.8
CDX87910	Canola	extracellular	30.2	28.84
CDX94091	Canola	mitochondrion	25.88	27.5
CDX94090	Canola	extracellular, vacuole	25.1	24.43
CDX98742	Canola	mitochondrion, vacuole	26.27	13.4

Protein Annotations

EnsemblPlants:CDY21856	EnsemblPlantsGene:GSBRNA2T00018159001	Gene3D:3.40.50.1820	GO:A0A078G907	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:AB_hydrolase	InterPro:IPR029058	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF34
PFAM:PF02230	ProteinID:CDY21856	ProteinID:CDY21856.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI0004EE7444
UniProt:A0A078G907	MapMan:35.1	:	:	:	:

Description

BnaC01g35920DBnaC01g35920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G907]

Coordinates

chrLK032125:+:338159..339985

Molecular Weight (calculated)

27486.7 Da

IEP (calculated)

7.628

GRAVY (calculated)

-0.107

Length

255 amino acids

Sequence
(BLAST)

001: MSYSRQSMGS GFSGARGYEF GRTYVVRPKG KHQATIVWLH GLGDNGSSSS QLLESLPLPN IKWICPTAPS RPVSLLGGFP CTAWFDVGEI SEDLHDDIEG
101: LDASAAHIAN LLSTEPTDVK VGIGGFSMGA AIALYSTTCY ALGRYGNGLP YTINLRATVG LSGWLPGWRS LRSKIESSNE AARRAASIPV ILAHGTSDDV
201: VPYRFGETSA QALAMAGFRQ VMFKQYEGLG HYTLPKEMNE VVHWLASRLG LEGSR

Best Arabidopsis Sequence Match ( AT3G15650.2 )
(BLAST)

001: MSYSRQSMGS GSRSTRGYEF GRTYVVRPKG KHQATIVWLH GLGDNGSRIL ACSLITTSHF GSVSFCSSSQ LLESLPLPNI KWICPTAPSR PVSLLGGFPC
101: TAWFDVGEIS EDLHDDIEGL DASAAHIANL LSAEPTDVKV GIGGFSMGAA IALYSTTCYA LGRYGTGHAY TINLRATVGL SGWLPGWRSL RSKIESSNEV
201: ARRAASIPIL LAHGTSDDVV PYRFGEKSAH SLAMAGFRQT MFKPYEGLGH YTVPKEMDEV VHWLVSRLGL EGSR

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J010]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.