Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plastid 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14573 | Canola | cytosol, extracellular, plasma membrane | 96.23 | 89.49 |
| CDY72010 | Canola | mitochondrion | 34.31 | 41.21 |
| CDY68953 | Canola | cytosol | 34.31 | 39.81 |
| CDY60557 | Canola | plastid | 42.26 | 39.61 |
| CDY02538 | Canola | mitochondrion | 41.84 | 39.22 |
| CDY58459 | Canola | plastid | 40.17 | 37.65 |
| CDY21856 | Canola | plastid | 39.75 | 37.25 |
| CDY30093 | Canola | plastid | 39.75 | 37.25 |
| CDY20140 | Canola | mitochondrion, plastid | 39.75 | 37.25 |
| CDX97691 | Canola | plastid | 39.33 | 36.86 |
| CDX75839 | Canola | plasma membrane | 39.33 | 35.07 |
| CDY62011 | Canola | endoplasmic reticulum, plasma membrane | 41.84 | 34.13 |
| CDY49908 | Canola | cytosol | 27.2 | 29.02 |
| CDX87910 | Canola | extracellular | 30.13 | 26.97 |
| CDY28985 | Canola | extracellular | 10.88 | 24.3 |
| CDX94091 | Canola | mitochondrion | 20.08 | 20.0 |
| CDX94090 | Canola | extracellular, vacuole | 21.76 | 19.85 |
| CDX98742 | Canola | mitochondrion, vacuole | 22.59 | 10.8 |
Protein Annotations
| EnsemblPlants:CDY08787 | EnsemblPlantsGene:GSBRNA2T00000726001 | Gene3D:3.40.50.1820 | GO:A0A078F6S2 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF55 |
| PFAM:PF02230 | ProteinID:CDY08787 | ProteinID:CDY08787.1 | SEG:seg | SUPFAM:SSF53474 | UniParc:UPI0004EE5E32 |
| UniProt:A0A078F6S2 | MapMan:35.2 | : | : | : | : |
Description
BnaA06g24370DBnaA06g24370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6S2]
Coordinates
chrLK031989:+:415140..416795
Molecular Weight (calculated)
25749.0 Da
IEP (calculated)
6.665
GRAVY (calculated)
0.100
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLCLVKIFT DGNGIAYGVT RLVRPRGTHK ATIVWLHDIG ENGDDSARFV RELNLPNVQI REHIKWICPT APRRPVSRLG GAVTTAWCDV TQVSENMEDD
101: LASINTTCVL VTNLLAGEPA HVMKGVGGIG LGAAQGLYFA SGYVAGGMGD MGLNAVVGIN GWLPAWTNFL YHIDSLTVSG TLAASLPILL TNENSTVPFQ
201: FGWLSEQSLS RAGIPVTFRP NDGRDPTAIG NWLKTYLQL
101: LASINTTCVL VTNLLAGEPA HVMKGVGGIG LGAAQGLYFA SGYVAGGMGD MGLNAVVGIN GWLPAWTNFL YHIDSLTVSG TLAASLPILL TNENSTVPFQ
201: FGWLSEQSLS RAGIPVTFRP NDGRDPTAIG NWLKTYLQL
001: MASGSINVSG LEFGQINTVY PTGIHKATIV WLHDVGNTGF NSLEPLQNLR LPNIKWICPT APRRRVTSLG GEITNAWCDI AKVSENMQDD FGTLNYVNEY
101: ITSLFSNEPQ NVIKGVAGLG LGAAQALYYT SCYAFGWVPI NPQIVIGING WLPGWRRLEY NMNNTNFGTA NRAAASKILI LHGTSDDVVP SSFGYRCADS
201: LRMAGFPTLF KQCGGDHVIN EIRVWLTNLG L
101: ITSLFSNEPQ NVIKGVAGLG LGAAQALYYT SCYAFGWVPI NPQIVIGING WLPGWRRLEY NMNNTNFGTA NRAAASKILI LHGTSDDVVP SSFGYRCADS
201: LRMAGFPTLF KQCGGDHVIN EIRVWLTNLG L
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GY12]
SUBAcon: [plastid,cytoskeleton,cytosol]
SUBAcon: [plastid,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.