Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87910 | Canola | extracellular | 90.62 | 76.03 |
| AT1G52440.1 | Thale cress | cytosol | 36.61 | 41.0 |
| AT1G52460.1 | Thale cress | cytosol | 39.29 | 38.26 |
| AT1G52470.1 | Thale cress | cytosol | 35.71 | 34.04 |
| CDY68953 | Canola | cytosol | 27.68 | 30.1 |
| CDY72010 | Canola | mitochondrion | 25.89 | 29.15 |
| CDY58459 | Canola | plastid | 31.7 | 27.84 |
| CDX97691 | Canola | plastid | 31.25 | 27.45 |
| CDY02538 | Canola | mitochondrion | 31.25 | 27.45 |
| CDY30093 | Canola | plastid | 31.25 | 27.45 |
| CDY60557 | Canola | plastid | 31.25 | 27.45 |
| CDY08787 | Canola | cytosol, plasma membrane, plastid | 29.02 | 27.2 |
| CDY20140 | Canola | mitochondrion, plastid | 30.8 | 27.06 |
| CDY21856 | Canola | plastid | 30.8 | 27.06 |
| CDY14573 | Canola | cytosol, extracellular, plasma membrane | 30.8 | 26.85 |
| CDX75839 | Canola | plasma membrane | 31.25 | 26.12 |
| CDY62011 | Canola | endoplasmic reticulum, plasma membrane | 30.8 | 23.55 |
| CDY28985 | Canola | extracellular | 10.27 | 21.5 |
| CDX94091 | Canola | mitochondrion | 12.5 | 11.67 |
| CDX94090 | Canola | extracellular, vacuole | 13.39 | 11.45 |
| CDX98742 | Canola | mitochondrion, vacuole | 13.84 | 6.2 |
Protein Annotations
| EnsemblPlants:CDY49908 | EnsemblPlantsGene:GSBRNA2T00094064001 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:IPR029058 | PANTHER:PTHR10655 |
| PANTHER:PTHR10655:SF55 | ProteinID:CDY49908 | ProteinID:CDY49908.1 | SEG:seg | SUPFAM:SSF53474 | UniParc:UPI0004EDCBB0 |
| UniProt:A0A078ILH0 | MapMan:35.2 | : | : | : | : |
Description
BnaA05g14850DBnaA05g14850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILH0]
Coordinates
chrLK032867:+:73245..75371
Molecular Weight (calculated)
24752.8 Da
IEP (calculated)
8.687
GRAVY (calculated)
-0.045
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSSSSNS IGTEDGYVLE PQGEHRVTIV WLHDVHENSY KSLQIVRSLN LRNIKWICLD SGTRVDVFSP GGGVPTNSWC NVGMITDTTR KIVGMKNVIK
101: GVGGVGQGAQ VALNFAKWNA VGDHTMNMRL VIGINSWRIP TNRIDYDFGA AIRSSWQSIL LIRGNLEPSI PLYFAKETAV SLIDDGFGEV SFVQFRMLGR
201: EITVNVLKKV EVWLNGKLPL DPNY
101: GVGGVGQGAQ VALNFAKWNA VGDHTMNMRL VIGINSWRIP TNRIDYDFGA AIRSSWQSIL LIRGNLEPSI PLYFAKETAV SLIDDGFGEV SFVQFRMLGR
201: EITVNVLKKV EVWLNGKLPL DPNY
001: MAASSSSNRA DFVVQPKGEH RVTIVWLHDK DEHFSDSVQF VKILNLNNIK WICPSLVLPT SRNKPEYNIN HALYLTAERV ANLFSDEPEN VIKGVGGFGM
101: GAAVALHFAT SCALNHYTIN PRVVVGISGW LSKAKSLKRS IEFASYEAPP RAASQSILLT HGQRDHVPHL CGCGEEAAFI LREAGFRDVR FLPFARFGPI
201: AHEINRNVMV KSWLEEKLPL DVVLAKECLP
101: GAAVALHFAT SCALNHYTIN PRVVVGISGW LSKAKSLKRS IEFASYEAPP RAASQSILLT HGQRDHVPHL CGCGEEAAFI LREAGFRDVR FLPFARFGPI
201: AHEINRNVMV KSWLEEKLPL DVVLAKECLP
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SSQ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.