Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G52440.1 | Thale cress | cytosol | 45.96 | 54.0 |
| AT1G52460.1 | Thale cress | cytosol | 50.21 | 51.3 |
| AT1G47780.1 | Thale cress | cytosol | 20.85 | 37.98 |
| CDY49908 | Canola | cytosol | 34.04 | 35.71 |
| AT1G52695.1 | Thale cress | cytoskeleton, cytosol, plastid | 32.77 | 33.33 |
| CDX87910 | Canola | extracellular | 37.45 | 32.96 |
| AT1G52700.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 35.74 | 32.94 |
| AT5G20060.2 | Thale cress | plastid | 32.34 | 30.16 |
| AT3G15650.2 | Thale cress | plastid | 34.89 | 29.93 |
| AT1G47786.1 | Thale cress | extracellular | 23.4 | 29.57 |
| AT1G51300.2 | Thale cress | plastid | 33.19 | 27.86 |
| AT4G22305.1 | Thale cress | cytosol, plastid | 14.89 | 15.35 |
| AT4G22300.1 | Thale cress | golgi | 16.17 | 14.5 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:841678 | ProteinID:AAD55618.1 | InterPro:AB_hydrolase | ProteinID:AEE32810.1 |
| ArrayExpress:AT1G52470 | EnsemblPlantsGene:AT1G52470 | RefSeq:AT1G52470 | TAIR:AT1G52470 | RefSeq:AT1G52470-TAIR-G | EnsemblPlants:AT1G52470.1 |
| TAIR:AT1G52470.1 | EMBL:AY954764 | Unigene:At.52160 | GO:GO:0002084 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008474 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0052689 | InterPro:IPR029058 | RefSeq:NP_175656.2 | PO:PO:0007616 | PO:PO:0009046 | PANTHER:PTHR10655 |
| PANTHER:PTHR10655:SF55 | UniProt:Q9SSQ1 | SUPFAM:SSF53474 | UniParc:UPI00000A4408 | SEG:seg | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SSQ1]
Coordinates
chr1:+:19553217..19555543
Molecular Weight (calculated)
26212.4 Da
IEP (calculated)
6.880
GRAVY (calculated)
-0.040
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSSRNGA NVLDLKCSHF VEPQGDQRAS IVWLHDKDEH FTDSVQFVKS LKLKNVNWIC PPIVYTNTSY DFGSNIKQDD REALDSAAKF VADLLLREPL
101: NVVKGVGGFG MGAVVALQFA TNCALGHYPI NPRVVVGING WLSITGSITS SIEYTVGAVA RAASQKIFFT RGAENRLLPY TREEEVVESL REAGFGDVFF
201: LIYSWLRHEH HLDIRDMLKL WLELSLPITK TSPLR
101: NVVKGVGGFG MGAVVALQFA TNCALGHYPI NPRVVVGING WLSITGSITS SIEYTVGAVA RAASQKIFFT RGAENRLLPY TREEEVVESL REAGFGDVFF
201: LIYSWLRHEH HLDIRDMLKL WLELSLPITK TSPLR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.