Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021124.1-P | Field mustard | plastid | 87.96 | 94.51 |
| Bra027221.1-P | Field mustard | mitochondrion | 85.4 | 94.35 |
| CDY20140 | Canola | mitochondrion, plastid | 87.59 | 94.12 |
| CDY58459 | Canola | plastid | 87.59 | 94.12 |
| CDY30093 | Canola | plastid | 87.23 | 93.73 |
| CDX97691 | Canola | plastid | 87.23 | 93.73 |
| CDY21856 | Canola | plastid | 86.13 | 92.55 |
| Bra001602.1-P | Field mustard | endoplasmic reticulum, extracellular | 87.23 | 89.18 |
| CDX75839 | Canola | plasma membrane | 85.77 | 87.69 |
| AT1G52700.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 80.29 | 86.27 |
| KRH23541 | Soybean | cytosol, mitochondrion, plastid | 71.9 | 76.95 |
| KRH44416 | Soybean | mitochondrion | 70.44 | 75.39 |
| Solyc06g067950.2.1 | Tomato | plastid | 69.34 | 74.22 |
| PGSC0003DMT400073482 | Potato | plastid | 68.98 | 73.83 |
| PGSC0003DMT400073687 | Potato | cytosol, nucleus, plastid | 68.61 | 73.15 |
| Solyc12g042890.1.1 | Tomato | cytosol, nucleus, plastid | 68.61 | 73.15 |
| KRH47496 | Soybean | plastid | 69.34 | 70.11 |
| KXG32884 | Sorghum | plastid | 63.14 | 69.48 |
| Zm00001d044460_P001 | Maize | cytosol | 61.68 | 68.7 |
| GSMUA_Achr6P01610_001 | Banana | plastid | 64.23 | 68.22 |
| KRH09772 | Soybean | plastid | 72.26 | 67.81 |
| OQU78517 | Sorghum | mitochondrion | 62.41 | 67.32 |
| Os04t0174900-01 | Rice | plastid | 61.31 | 66.14 |
| TraesCS1B01G463000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 61.31 | 66.14 |
| TraesCS1D01G437600.1 | Wheat | plastid | 61.31 | 66.14 |
| VIT_09s0002g06010.t01 | Wine grape | extracellular | 70.07 | 65.75 |
| Zm00001d009726_P002 | Maize | mitochondrion | 60.95 | 65.75 |
| TraesCS1A01G428100.1 | Wheat | plastid | 60.95 | 65.75 |
| AT5G20060.2 | Thale cress | plastid | 60.22 | 65.48 |
| TraesCS3A01G219200.1 | Wheat | mitochondrion | 58.76 | 64.66 |
| Os01t0612500-01 | Rice | plastid | 56.93 | 64.2 |
| TraesCS3B01G249600.2 | Wheat | mitochondrion | 58.76 | 63.89 |
| TraesCS3D01G233300.1 | Wheat | mitochondrion | 58.39 | 63.49 |
| GSMUA_Achr6P01540_001 | Banana | mitochondrion | 62.04 | 62.5 |
| HORVU6Hr1G043710.1 | Barley | cytosol, extracellular, mitochondrion, plastid | 23.36 | 53.33 |
| Os05t0588100-00 | Rice | cytosol | 52.55 | 50.7 |
| HORVU1Hr1G093460.5 | Barley | cytosol, plastid | 56.93 | 50.0 |
| AT1G47780.1 | Thale cress | cytosol | 21.9 | 46.51 |
| AT1G52695.1 | Thale cress | cytoskeleton, cytosol, plastid | 39.05 | 46.32 |
| HORVU7Hr1G061760.2 | Barley | mitochondrion | 33.21 | 43.13 |
| TraesCS3B01G193000.1 | Wheat | extracellular, peroxisome | 19.71 | 42.52 |
| AT1G52460.1 | Thale cress | cytosol | 33.94 | 40.43 |
| AT1G52440.1 | Thale cress | cytosol | 28.47 | 39.0 |
| AT1G47786.1 | Thale cress | extracellular | 26.28 | 38.71 |
| AT1G51300.2 | Thale cress | plastid | 36.13 | 35.36 |
| AT1G52470.1 | Thale cress | cytosol | 29.93 | 34.89 |
| AT4G22305.1 | Thale cress | cytosol, plastid | 23.72 | 28.51 |
| AT4G22300.1 | Thale cress | golgi | 23.36 | 24.43 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:820808 | InterPro:AB_hydrolase | ProteinID:AEE75709.1 | ArrayExpress:AT3G15650 |
| EnsemblPlantsGene:AT3G15650 | RefSeq:AT3G15650 | TAIR:AT3G15650 | RefSeq:AT3G15650-TAIR-G | EnsemblPlants:AT3G15650.2 | TAIR:AT3G15650.2 |
| Unigene:At.39011 | UniProt:F4J010 | GO:GO:0002084 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008474 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0052689 |
| InterPro:IPR029058 | RefSeq:NP_001189903.1 | PFAM:PF02230 | InterPro:PLipase/COase/thioEstase | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF34 | SUPFAM:SSF53474 | UniParc:UPI0001E92E1B |
| SEG:seg | : | : | : | : | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J010]
Coordinates
chr3:+:5305918..5307932
Molecular Weight (calculated)
29615.3 Da
IEP (calculated)
8.226
GRAVY (calculated)
-0.069
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYSRQSMGS GSRSTRGYEF GRTYVVRPKG KHQATIVWLH GLGDNGSRIL ACSLITTSHF GSVSFCSSSQ LLESLPLPNI KWICPTAPSR PVSLLGGFPC
101: TAWFDVGEIS EDLHDDIEGL DASAAHIANL LSAEPTDVKV GIGGFSMGAA IALYSTTCYA LGRYGTGHAY TINLRATVGL SGWLPGWRSL RSKIESSNEV
201: ARRAASIPIL LAHGTSDDVV PYRFGEKSAH SLAMAGFRQT MFKPYEGLGH YTVPKEMDEV VHWLVSRLGL EGSR
101: TAWFDVGEIS EDLHDDIEGL DASAAHIANL LSAEPTDVKV GIGGFSMGAA IALYSTTCYA LGRYGTGHAY TINLRATVGL SGWLPGWRSL RSKIESSNEV
201: ARRAASIPIL LAHGTSDDVV PYRFGEKSAH SLAMAGFRQT MFKPYEGLGH YTVPKEMDEV VHWLVSRLGL EGSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.