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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 1
  • plastid 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH63025 Soybean mitochondrion, plastid 76.59 74.81
VIT_11s0016g04850.t01 Wine grape plastid 75.79 74.61
Solyc12g006870.1.1 Tomato plastid 74.21 73.05
KRH54871 Soybean mitochondrion 62.3 65.15
AT1G52700.2 Thale cress cytosol, mitochondrion, nucleus, plastid 65.87 65.1
AT3G15650.2 Thale cress plastid 65.48 60.22
GSMUA_Achr10P... Banana cytosol 17.06 46.74
AT1G47780.1 Thale cress cytosol 20.24 39.53
AT1G52695.1 Thale cress cytoskeleton, cytosol, plastid 36.11 39.39
AT1G52460.1 Thale cress cytosol 32.94 36.09
AT1G52440.1 Thale cress cytosol 27.38 34.5
AT1G51300.2 Thale cress plastid 36.9 33.21
AT1G47786.1 Thale cress extracellular 24.21 32.8
AT1G52470.1 Thale cress cytosol 30.16 32.34
AT4G22305.1 Thale cress cytosol, plastid 23.81 26.32
AT4G22300.1 Thale cress golgi 25.0 24.05
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.1EntrezGene:832128UniProt:A0A178UC20InterPro:AB_hydrolaseProteinID:AED92787.1
ProteinID:AED92788.1ProteinID:AED92789.1ProteinID:ANM70209.1ArrayExpress:AT5G20060EnsemblPlantsGene:AT5G20060RefSeq:AT5G20060
TAIR:AT5G20060RefSeq:AT5G20060-TAIR-GEnsemblPlants:AT5G20060.2TAIR:AT5G20060.2EMBL:AY088171Unigene:At.23376
EMBL:BT000428EMBL:BT001175GO:GO:0002084GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006464GO:GO:0008150GO:GO:0008152
GO:GO:0008474GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0052689
InterPro:IPR029058RefSeq:NP_001031909.1RefSeq:NP_001331839.1RefSeq:NP_197506.1RefSeq:NP_974815.1ProteinID:OAO91398.1
PFAM:PF02230InterPro:PLipase/COase/thioEstasePO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281PANTHER:PTHR10655
PANTHER:PTHR10655:SF34UniProt:Q8L9X1MEROPS:S09.A56SUPFAM:SSF53474UniParc:UPI00000AC73E:
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L9X1]
Coordinates
chr5:+:6776208..6779614
Molecular Weight (calculated)
26729.0 Da
IEP (calculated)
6.620
GRAVY (calculated)
0.004
Length
252 amino acids
Sequence
(BLAST)
001: MSISGAAVGS GRNLRRAVEF GKTHVVRPKG KHQATIVWLH GLGDNGSSWS QLLETLPLPN IKWICPTAPS QPISLFGGFP STAWFDVVDI NEDGPDDMEG
101: LDVAAAHVAN LLSNEPADIK LGVGGFSMGA ATSLYSATCF ALGKYGNGNP YPINLSAIIG LSGWLPCAKT LAGKLEEEQI KNRAASLPIV VCHGKADDVV
201: PFKFGEKSSQ ALLSNGFKKV TFKPYSALGH HTIPQELDEL CAWLTSTLSL EG
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.