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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 7
  • mitochondrion 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:nucleus, plasma membrane, plastid
Predotar:plastid
PProwler:plastid
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G52695.1 Thale cress cytoskeleton, cytosol, plastid 31.43 38.1
AT1G52700.2 Thale cress cytosol, mitochondrion, nucleus, plastid 34.64 38.04
AT1G52460.1 Thale cress cytosol 30.36 36.96
AT5G20060.2 Thale cress plastid 33.21 36.9
AT1G47780.1 Thale cress cytosol 16.79 36.43
AT3G15650.2 Thale cress plastid 35.36 36.13
AT1G52440.1 Thale cress cytosol 25.36 35.5
AT1G52470.1 Thale cress cytosol 27.86 33.19
AT1G47786.1 Thale cress extracellular 18.93 28.49
AT4G22305.1 Thale cress cytosol, plastid 17.5 21.49
AT4G22300.1 Thale cress golgi 19.64 20.99
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.2EntrezGene:841553UniProt:A0A1P8AUU6InterPro:AB_hydrolaseProteinID:ANM60451.1
ArrayExpress:AT1G51300EnsemblPlantsGene:AT1G51300RefSeq:AT1G51300TAIR:AT1G51300RefSeq:AT1G51300-TAIR-GEnsemblPlants:AT1G51300.2
GO:GO:0003674GO:GO:0003824GO:GO:0016787InterPro:IPR029058RefSeq:NP_001322736.1PFAM:PF02230
InterPro:PLipase/COase/thioEstasePANTHER:PTHR10655PANTHER:PTHR10655:SF55SUPFAM:SSF53474UniParc:UPI0008495EF3SEG:seg
Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT1G51300]
Coordinates
chr1:-:19014255..19016205
Molecular Weight (calculated)
30729.0 Da
IEP (calculated)
9.907
GRAVY (calculated)
-0.058
Length
280 amino acids
Sequence
(BLAST)
001: MASGLFSFQK SMASGSTRAK VTAEFHSKKK VTTEFGDTVT VTPRARHQAT IVWLHDLNES GYDSSELVKS FSLYNVKWIC PSSPLISNVG FGGAPARAWF
101: KVNEFSSRMP DPYEMEGLKN SAAHVAGLLK NEPENVMKGV AGYGIGGALA LHIATCYALG SFPIQIRAVV GINCWLPNRF KLGDQIESIP DATSRAGELS
201: VLVTHGNNDK MVPYETGRSS AEKLSKAGFK QIKLKTIHLY KPSTTFFSSL LSQLLYFRLL YYFTKLISSC AVVTMPSFSR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.