Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- cytoskeleton 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68953 | Canola | cytosol | 58.01 | 65.05 |
| Bra018982.1-P | Field mustard | cytosol | 20.35 | 62.67 |
| AT1G47780.1 | Thale cress | cytosol | 28.14 | 50.39 |
| AT1G47786.1 | Thale cress | extracellular | 35.06 | 43.55 |
| AT1G52700.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 46.75 | 42.35 |
| AT3G15650.2 | Thale cress | plastid | 46.32 | 39.05 |
| AT5G20060.2 | Thale cress | plastid | 39.39 | 36.11 |
| AT1G52440.1 | Thale cress | cytosol | 29.44 | 34.0 |
| AT1G52460.1 | Thale cress | cytosol | 33.33 | 33.48 |
| AT1G52470.1 | Thale cress | cytosol | 33.33 | 32.77 |
| AT1G51300.2 | Thale cress | plastid | 38.1 | 31.43 |
| AT4G22305.1 | Thale cress | cytosol, plastid | 19.05 | 19.3 |
| AT4G22300.1 | Thale cress | golgi | 18.61 | 16.41 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:841702 | InterPro:AB_hydrolase | ProteinID:AEE32840.1 | EMBL:AK117929 |
| ArrayExpress:AT1G52695 | EnsemblPlantsGene:AT1G52695 | RefSeq:AT1G52695 | TAIR:AT1G52695 | RefSeq:AT1G52695-TAIR-G | EnsemblPlants:AT1G52695.1 |
| TAIR:AT1G52695.1 | Unigene:At.47273 | EMBL:BT005250 | GO:GO:0002084 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008474 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0052689 | InterPro:IPR029058 | RefSeq:NP_849799.1 | PFAM:PF02230 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 |
| PANTHER:PTHR10655:SF55 | UniProt:Q8GY12 | SUPFAM:SSF53474 | UniParc:UPI000000C5A7 | SEG:seg | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8GY12]
Coordinates
chr1:-:19621238..19623461
Molecular Weight (calculated)
25330.3 Da
IEP (calculated)
7.404
GRAVY (calculated)
-0.013
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGSINVSG LEFGQINTVY PTGIHKATIV WLHDVGNTGF NSLEPLQNLR LPNIKWICPT APRRRVTSLG GEITNAWCDI AKVSENMQDD FGTLNYVNEY
101: ITSLFSNEPQ NVIKGVAGLG LGAAQALYYT SCYAFGWVPI NPQIVIGING WLPGWRRLEY NMNNTNFGTA NRAAASKILI LHGTSDDVVP SSFGYRCADS
201: LRMAGFPTLF KQCGGDHVIN EIRVWLTNLG L
101: ITSLFSNEPQ NVIKGVAGLG LGAAQALYYT SCYAFGWVPI NPQIVIGING WLPGWRRLEY NMNNTNFGTA NRAAASKILI LHGTSDDVVP SSFGYRCADS
201: LRMAGFPTLF KQCGGDHVIN EIRVWLTNLG L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.