Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72010 | Canola | mitochondrion | 72.55 | 92.96 |
| CDY60557 | Canola | plastid | 92.94 | 92.94 |
| Bra030973.1-P | Field mustard | cytosol, mitochondrion, plastid | 91.37 | 91.37 |
| CDY02538 | Canola | mitochondrion | 90.98 | 90.98 |
| Bra030370.1-P | Field mustard | extracellular | 89.41 | 86.69 |
| CDY62011 | Canola | endoplasmic reticulum, plasma membrane | 92.55 | 80.55 |
| AT3G15650.2 | Thale cress | plastid | 86.27 | 80.29 |
| KRH44416 | Soybean | mitochondrion | 76.86 | 76.56 |
| KRH23541 | Soybean | cytosol, mitochondrion, plastid | 76.08 | 75.78 |
| Solyc12g042890.1.1 | Tomato | cytosol, nucleus, plastid | 73.73 | 73.15 |
| PGSC0003DMT400073687 | Potato | cytosol, nucleus, plastid | 73.73 | 73.15 |
| Solyc06g067950.2.1 | Tomato | plastid | 72.94 | 72.66 |
| PGSC0003DMT400073482 | Potato | plastid | 72.55 | 72.27 |
| KRH47496 | Soybean | plastid | 75.69 | 71.22 |
| KXG32884 | Sorghum | plastid | 66.27 | 67.87 |
| GSMUA_Achr6P01610_001 | Banana | plastid | 67.84 | 67.05 |
| Zm00001d044460_P001 | Maize | cytosol | 64.31 | 66.67 |
| KRH09772 | Soybean | plastid | 76.08 | 66.44 |
| OQU78517 | Sorghum | mitochondrion | 65.88 | 66.14 |
| AT5G20060.2 | Thale cress | plastid | 65.1 | 65.87 |
| VIT_09s0002g06010.t01 | Wine grape | extracellular | 74.9 | 65.41 |
| Os04t0174900-01 | Rice | plastid | 65.1 | 65.35 |
| TraesCS1D01G437600.1 | Wheat | plastid | 64.71 | 64.96 |
| TraesCS1B01G463000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 64.71 | 64.96 |
| Zm00001d009726_P002 | Maize | mitochondrion | 64.31 | 64.57 |
| TraesCS1A01G428100.1 | Wheat | plastid | 64.31 | 64.57 |
| TraesCS3A01G219200.1 | Wheat | mitochondrion | 61.96 | 63.45 |
| Os01t0612500-01 | Rice | plastid | 60.39 | 63.37 |
| TraesCS3B01G249600.2 | Wheat | mitochondrion | 61.96 | 62.7 |
| TraesCS3D01G233300.1 | Wheat | mitochondrion | 61.57 | 62.3 |
| GSMUA_Achr6P01540_001 | Banana | mitochondrion | 65.49 | 61.4 |
| HORVU6Hr1G043710.1 | Barley | cytosol, extracellular, mitochondrion, plastid | 25.88 | 55.0 |
| Os05t0588100-00 | Rice | cytosol | 57.25 | 51.41 |
| HORVU1Hr1G093460.5 | Barley | cytosol, plastid | 60.39 | 49.36 |
| AT1G52695.1 | Thale cress | cytoskeleton, cytosol, plastid | 42.35 | 46.75 |
| HORVU7Hr1G061760.2 | Barley | mitochondrion | 38.04 | 45.97 |
| AT1G47780.1 | Thale cress | cytosol | 23.14 | 45.74 |
| TraesCS3B01G193000.1 | Wheat | extracellular, peroxisome | 21.57 | 43.31 |
| AT1G52460.1 | Thale cress | cytosol | 36.47 | 40.43 |
| AT1G47786.1 | Thale cress | extracellular | 27.84 | 38.17 |
| AT1G52440.1 | Thale cress | cytosol | 29.8 | 38.0 |
| AT1G52470.1 | Thale cress | cytosol | 32.94 | 35.74 |
| AT1G51300.2 | Thale cress | plastid | 38.04 | 34.64 |
| AT4G22305.1 | Thale cress | cytosol, plastid | 25.1 | 28.07 |
| AT4G22300.1 | Thale cress | golgi | 24.31 | 23.66 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.1 | EntrezGene:841703 | UniProt:A0A178WKZ7 | UniProt:A0A1P8AQT5 | InterPro:AB_hydrolase |
| ProteinID:ANM59018.1 | ProteinID:ANM59019.1 | ArrayExpress:AT1G52700 | EnsemblPlantsGene:AT1G52700 | RefSeq:AT1G52700 | TAIR:AT1G52700 |
| RefSeq:AT1G52700-TAIR-G | EnsemblPlants:AT1G52700.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 | InterPro:IPR029058 |
| RefSeq:NP_001321415.1 | RefSeq:NP_175679.2 | ProteinID:OAP18866.1 | PFAM:PF02230 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 |
| PANTHER:PTHR10655:SF34 | SUPFAM:SSF53474 | UniParc:UPI000034F493 | : | : | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQT5]
Coordinates
chr1:-:19630884..19634039
Molecular Weight (calculated)
27476.6 Da
IEP (calculated)
7.060
GRAVY (calculated)
-0.138
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYSHQSMGS GSRNARGYEF GRTYVVRPKG KHQATLVWLH GLGDNGSSSS QLMDSLHLPN IKWICPTAPS RPVTSLGGFT CTAWFDVGEI SEDGHDDLEG
101: LDASASHIAN LLSSEPADVK VGIGGFSMGA AISLYSATCY ALGRYGTGHA YPINLQAVVG LSGWLPGWKS LRSKIECSFE AARRAASLPI ILTHGTSDDV
201: VPYRFGEKSA QSLGMAGFRL AMFKPYEGLG HYTVPREMDE VVHWLTTMLG LEGSR
101: LDASASHIAN LLSSEPADVK VGIGGFSMGA AISLYSATCY ALGRYGTGHA YPINLQAVVG LSGWLPGWKS LRSKIECSFE AARRAASLPI ILTHGTSDDV
201: VPYRFGEKSA QSLGMAGFRL AMFKPYEGLG HYTVPREMDE VVHWLTTMLG LEGSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.