Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 4
- extracellular 5
- cytosol 2
- vacuole 3
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G47780.1 | Thale cress | cytosol | 49.46 | 71.32 |
| AT1G52695.1 | Thale cress | cytoskeleton, cytosol, plastid | 43.55 | 35.06 |
| AT1G52700.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 38.17 | 27.84 |
| AT3G15650.2 | Thale cress | plastid | 38.71 | 26.28 |
| AT5G20060.2 | Thale cress | plastid | 32.8 | 24.21 |
| AT1G52470.1 | Thale cress | cytosol | 29.57 | 23.4 |
| AT1G52460.1 | Thale cress | cytosol | 28.49 | 23.04 |
| AT1G52440.1 | Thale cress | cytosol | 24.19 | 22.5 |
| AT1G51300.2 | Thale cress | plastid | 28.49 | 18.93 |
| AT4G22305.1 | Thale cress | cytosol, plastid | 16.13 | 13.16 |
| AT4G22300.1 | Thale cress | golgi | 18.28 | 12.98 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:841192 | InterPro:AB_hydrolase | ProteinID:AEE32213.1 | ArrayExpress:AT1G47786 |
| EnsemblPlantsGene:AT1G47786 | RefSeq:AT1G47786 | TAIR:AT1G47786 | RefSeq:AT1G47786-TAIR-G | EnsemblPlants:AT1G47786.1 | TAIR:AT1G47786.1 |
| Unigene:At.52059 | UniProt:F4HV37 | GO:GO:0002084 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008474 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0052689 |
| InterPro:IPR029058 | RefSeq:NP_175212.1 | PFAM:PF02230 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF55 |
| SUPFAM:SSF53474 | UniParc:UPI000016308F | : | : | : | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HV37]
Coordinates
chr1:+:17597898..17599099
Molecular Weight (calculated)
20841.2 Da
IEP (calculated)
8.652
GRAVY (calculated)
0.006
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLAYFSKLL DYILSYIYYV ELINESAYVK LFTARRNVGG IKFEDVQSFG PIGTHKATIV WLHDIGETSA NSVRFARQLG LRNIKWICPT APRRPVTILG
101: GMETNAWFDI AEISENMQDD EVSLHHAALS IANLFSDHAS PNIGGMGMGA AQALYLASKS CYDTNQRLQI KPRVVIGLKG WLPGWR
101: GMETNAWFDI AEISENMQDD EVSLHHAALS IANLFSDHAS PNIGGMGMGA AQALYLASKS CYDTNQRLQI KPRVVIGLKG WLPGWR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.