Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
- plasma membrane 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G47786.1 | Thale cress | extracellular | 71.32 | 49.46 |
| AT1G52695.1 | Thale cress | cytoskeleton, cytosol, plastid | 50.39 | 28.14 |
| AT1G52700.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 45.74 | 23.14 |
| AT3G15650.2 | Thale cress | plastid | 46.51 | 21.9 |
| AT1G52470.1 | Thale cress | cytosol | 37.98 | 20.85 |
| AT5G20060.2 | Thale cress | plastid | 39.53 | 20.24 |
| AT1G52460.1 | Thale cress | cytosol | 31.01 | 17.39 |
| AT1G51300.2 | Thale cress | plastid | 36.43 | 16.79 |
| AT1G52440.1 | Thale cress | cytosol | 24.81 | 16.0 |
| AT4G22305.1 | Thale cress | cytosol, plastid | 20.16 | 11.4 |
| AT4G22300.1 | Thale cress | golgi | 20.93 | 10.31 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:841190 | InterPro:AB_hydrolase | ProteinID:AEE32212.2 | ArrayExpress:AT1G47780 |
| EnsemblPlantsGene:AT1G47780 | RefSeq:AT1G47780 | TAIR:AT1G47780 | RefSeq:AT1G47780-TAIR-G | EnsemblPlants:AT1G47780.1 | TAIR:AT1G47780.1 |
| UniProt:F4HV36 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | InterPro:IPR029058 | RefSeq:NP_001319169.1 | PFAM:PF02230 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 |
| PANTHER:PTHR10655:SF55 | SUPFAM:SSF53474 | UniParc:UPI000848C1D0 | SEG:seg | : | : |
Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT1G47780]
Coordinates
chr1:+:17594683..17595353
Molecular Weight (calculated)
14360.5 Da
IEP (calculated)
7.254
GRAVY (calculated)
0.019
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAVQLDLQD RWVLKMYGWM NKNVKWICPT APRRPLTILG GMETNAWFDI AELSENMQDD VASLNHAALS IANLLSEEPT NVMIGIGGIG FGAAQALYLA
101: SKGCYDTNQR LQIKPRVVIG LNGWLPVWR
101: SKGCYDTNQR LQIKPRVVIG LNGWLPVWR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.