Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G249600.2 | Wheat | mitochondrion | 99.2 | 98.02 |
| TraesCS3D01G233300.1 | Wheat | mitochondrion | 98.39 | 97.22 |
| KXG32884 | Sorghum | plastid | 80.32 | 80.32 |
| Zm00001d044460_P001 | Maize | cytosol | 78.71 | 79.67 |
| TraesCS1A01G428100.1 | Wheat | plastid | 80.72 | 79.13 |
| Os01t0612500-01 | Rice | plastid | 75.9 | 77.78 |
| GSMUA_Achr6P01610_001 | Banana | plastid | 74.3 | 71.71 |
| Solyc06g067950.2.1 | Tomato | plastid | 67.87 | 66.02 |
| PGSC0003DMT400073482 | Potato | plastid | 67.87 | 66.02 |
| GSMUA_Achr6P01540_001 | Banana | mitochondrion | 70.68 | 64.71 |
| Solyc12g042890.1.1 | Tomato | cytosol, nucleus, plastid | 66.67 | 64.59 |
| PGSC0003DMT400073687 | Potato | cytosol, nucleus, plastid | 66.67 | 64.59 |
| Bra027221.1-P | Field mustard | mitochondrion | 63.86 | 64.11 |
| KRH23541 | Soybean | cytosol, mitochondrion, plastid | 65.86 | 64.06 |
| CDY72010 | Canola | mitochondrion | 50.2 | 62.81 |
| CDX97691 | Canola | plastid | 64.26 | 62.75 |
| CDY20140 | Canola | mitochondrion, plastid | 64.26 | 62.75 |
| CDY21856 | Canola | plastid | 64.26 | 62.75 |
| Bra021124.1-P | Field mustard | plastid | 64.26 | 62.75 |
| KRH44416 | Soybean | mitochondrion | 64.26 | 62.5 |
| CDY58459 | Canola | plastid | 63.86 | 62.35 |
| CDY30093 | Canola | plastid | 63.45 | 61.96 |
| AT1G52700.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 63.45 | 61.96 |
| Bra030973.1-P | Field mustard | cytosol, mitochondrion, plastid | 62.25 | 60.78 |
| CDY60557 | Canola | plastid | 62.25 | 60.78 |
| CDY02538 | Canola | mitochondrion | 62.25 | 60.78 |
| Bra001602.1-P | Field mustard | endoplasmic reticulum, extracellular | 64.66 | 60.07 |
| CDX75839 | Canola | plasma membrane | 63.45 | 58.96 |
| VIT_09s0002g06010.t01 | Wine grape | extracellular | 69.08 | 58.9 |
| AT3G15650.2 | Thale cress | plastid | 64.66 | 58.76 |
| Bra030370.1-P | Field mustard | extracellular | 61.45 | 58.17 |
| KRH47496 | Soybean | plastid | 62.65 | 57.56 |
| KRH09772 | Soybean | plastid | 65.06 | 55.48 |
| TraesCS3A01G127800.1 | Wheat | plastid | 60.24 | 53.19 |
| CDY62011 | Canola | endoplasmic reticulum, plasma membrane | 61.85 | 52.56 |
| CDY28985 | Canola | extracellular | 18.47 | 42.99 |
| TraesCS2A01G543000.1 | Wheat | mitochondrion | 24.9 | 28.05 |
| TraesCS2A01G543100.1 | Wheat | plastid | 23.29 | 23.77 |
| TraesCS2A01G543400.1 | Wheat | mitochondrion, plastid | 18.47 | 21.8 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G219200.1 | EnsemblPlantsGene:TraesCS3A01G219200 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF54 | PFAM:PF02230 |
| SUPFAM:SSF53474 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:402131787..402134667
Molecular Weight (calculated)
26854.8 Da
IEP (calculated)
8.485
GRAVY (calculated)
-0.187
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSGARGVR REYGRTYVVR PKGRHLATIV WLHGIGDNGN SWSQVLGNLP LDNVKWICPT APTRPVAAFG GFPCTAWFDV EETSVDGPDD VQGLDASAAH
101: IANLLSSEPS DVRLGIGGFS MGAATALHSA ACYAHGRFSN GVAYPITLSA IIGLSGWLPC SRTLRTKIES SQTAFRRAAA LPIMLGHGRG DEVVTYRNGE
201: RSSEFLRNSG FSYLNFKAYN GLGHHTIPEE MDDVSKWLRA RLGLDRSCG
101: IANLLSSEPS DVRLGIGGFS MGAATALHSA ACYAHGRFSN GVAYPITLSA IIGLSGWLPC SRTLRTKIES SQTAFRRAAA LPIMLGHGRG DEVVTYRNGE
201: RSSEFLRNSG FSYLNFKAYN GLGHHTIPEE MDDVSKWLRA RLGLDRSCG
001: MSYSHQSMGS GSRNARGYEF GRTYVVRPKG KHQATLVWLH GLGDNGSSSS QLMDSLHLPN IKWICPTAPS RPVTSLGGFT CTAWFDVGEI SEDGHDDLEG
101: LDASASHIAN LLSSEPADVK VGIGGFSMGA AISLYSATCY ALGRYGTGHA YPINLQAVVG LSGWLPGWKS LRSKIECSFE AARRAASLPI ILTHGTSDDV
201: VPYRFGEKSA QSLGMAGFRL AMFKPYEGLG HYTVPREMDE VVHWLTTMLG LEGSR
101: LDASASHIAN LLSSEPADVK VGIGGFSMGA AISLYSATCY ALGRYGTGHA YPINLQAVVG LSGWLPGWKS LRSKIECSFE AARRAASLPI ILTHGTSDDV
201: VPYRFGEKSA QSLGMAGFRL AMFKPYEGLG HYTVPREMDE VVHWLTTMLG LEGSR
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQT5]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.