Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G128800.2 | Wheat | plastid | 94.68 | 100.0 |
| TraesCS3B01G147000.2 | Wheat | plastid | 89.01 | 89.32 |
| Os01t0175000-03 | Rice | plastid | 74.82 | 82.1 |
| KXG31735 | Sorghum | plastid | 73.76 | 81.57 |
| GSMUA_Achr2P19690_001 | Banana | plastid | 67.02 | 73.54 |
| HORVU3Hr1G023960.1 | Barley | plastid | 81.21 | 69.6 |
| TraesCS1A01G428100.1 | Wheat | plastid | 55.67 | 61.81 |
| TraesCS3A01G219200.1 | Wheat | mitochondrion | 53.19 | 60.24 |
| Zm00001d039653_P005 | Maize | extracellular | 71.63 | 58.38 |
| GSMUA_Achr10P... | Banana | extracellular | 57.09 | 49.69 |
| Zm00001d008737_P001 | Maize | cytosol, plastid | 36.17 | 48.57 |
| TraesCS2A01G543000.1 | Wheat | mitochondrion | 22.34 | 28.51 |
| TraesCS2A01G543100.1 | Wheat | plastid | 20.57 | 23.77 |
| TraesCS2A01G543400.1 | Wheat | mitochondrion, plastid | 15.6 | 20.85 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G127800.1 | EnsemblPlantsGene:TraesCS3A01G127800 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:PLipase/COase/thioEstase | ncoils:Coil | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF34 |
| PFAM:PF02230 | SEG:seg | SUPFAM:SSF53474 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr3A:+:104414814..104417640
Molecular Weight (calculated)
30452.2 Da
IEP (calculated)
9.398
GRAVY (calculated)
-0.252
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFGGASSVA AGGKRPFEYG RTHVVRPKGA HKATIVWLHG LGDNGASWSQ LLETLPLPNI KWICPTAPTR PVAIFGGFPS TAWFDVADLS EDSPDDVEGL
101: DSSAAHVANL LSTEPADIKL GVGGFSMGAA TALYSGTCFA HGKYGNGNPY PVNLSVAVGL SGWLPCARSL KNKIESSQEA AQKASSLPLM LCHGKADDVV
201: LYKHGERSAD ALKSTGFANV EFKSYNSGTI PFQRRWTKSS SGLRQAWNSA VPRQLDRMKR CLEKGSVWRH LNNKYLWLCR IE
101: DSSAAHVANL LSTEPADIKL GVGGFSMGAA TALYSGTCFA HGKYGNGNPY PVNLSVAVGL SGWLPCARSL KNKIESSQEA AQKASSLPLM LCHGKADDVV
201: LYKHGERSAD ALKSTGFANV EFKSYNSGTI PFQRRWTKSS SGLRQAWNSA VPRQLDRMKR CLEKGSVWRH LNNKYLWLCR IE
001: MSYSRQSMGS GSRSTRGYEF GRTYVVRPKG KHQATIVWLH GLGDNGSRIL ACSLITTSHF GSVSFCSSSQ LLESLPLPNI KWICPTAPSR PVSLLGGFPC
101: TAWFDVGEIS EDLHDDIEGL DASAAHIANL LSAEPTDVKV GIGGFSMGAA IALYSTTCYA LGRYGTGHAY TINLRATVGL SGWLPGWRSL RSKIESSNEV
201: ARRAASIPIL LAHGTSDDVV PYRFGEKSAH SLAMAGFRQT MFKPYEGLGH YTVPKEMDEV VHWLVSRLGL EGSR
101: TAWFDVGEIS EDLHDDIEGL DASAAHIANL LSAEPTDVKV GIGGFSMGAA IALYSTTCYA LGRYGTGHAY TINLRATVGL SGWLPGWRSL RSKIESSNEV
201: ARRAASIPIL LAHGTSDDVV PYRFGEKSAH SLAMAGFRQT MFKPYEGLGH YTVPKEMDEV VHWLVSRLGL EGSR
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J010]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.