Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G128800.2 | Wheat | plastid | 89.32 | 94.01 |
| TraesCS3A01G127800.1 | Wheat | plastid | 89.32 | 89.01 |
| Os01t0175000-03 | Rice | plastid | 75.09 | 82.1 |
| KXG31735 | Sorghum | plastid | 73.31 | 80.78 |
| GSMUA_Achr2P19690_001 | Banana | plastid | 66.9 | 73.15 |
| HORVU3Hr1G023960.1 | Barley | plastid | 82.21 | 70.21 |
| TraesCS1B01G463000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 55.52 | 61.42 |
| TraesCS3B01G249600.2 | Wheat | mitochondrion | 53.02 | 59.13 |
| Zm00001d039653_P005 | Maize | extracellular | 71.17 | 57.8 |
| GSMUA_Achr10P... | Banana | extracellular | 57.65 | 50.0 |
| Zm00001d008737_P001 | Maize | cytosol, plastid | 36.3 | 48.57 |
| TraesCS3B01G193000.1 | Wheat | extracellular, peroxisome | 16.73 | 37.01 |
| TraesCS2B01G572800.1 | Wheat | mitochondrion | 23.84 | 25.48 |
| TraesCS2B01G572900.1 | Wheat | plastid | 21.0 | 24.18 |
| TraesCS2B01G573500.1 | Wheat | cytosol, nucleus, peroxisome | 20.64 | 23.29 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G147000.2 | EnsemblPlantsGene:TraesCS3B01G147000 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:PLipase/COase/thioEstase | ncoils:Coil | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF34 |
| PFAM:PF02230 | SEG:seg | SUPFAM:SSF53474 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr3B:+:137322401..137325116
Molecular Weight (calculated)
30063.6 Da
IEP (calculated)
6.933
GRAVY (calculated)
-0.054
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFGGASSVA AGGKRPFEYG RTHVVRPKGA HKATIVWLHG LGDNGASWSQ LLETLPLPNI KWICPTAPTR PVAIFGGFPS TAWFDVADLS EDSPDDVEGL
101: DSSAAHVANL LSTEPADIKL GVGGFSMGAA TALYSGTCFA HGKYGNGNPY PVNLSVAVGL SGWLPCARSL KNKIESSQEA AQKASSLPLM LCHGKADDVV
201: LYKHGERSAD ALKSTGFANV EFKSYSRFAT FFIPLECCDF LVLIDLLSLE DSGTIPFQRR WTKLSSGLQQ AWNSAVHRQL D
101: DSSAAHVANL LSTEPADIKL GVGGFSMGAA TALYSGTCFA HGKYGNGNPY PVNLSVAVGL SGWLPCARSL KNKIESSQEA AQKASSLPLM LCHGKADDVV
201: LYKHGERSAD ALKSTGFANV EFKSYSRFAT FFIPLECCDF LVLIDLLSLE DSGTIPFQRR WTKLSSGLQQ AWNSAVHRQL D
001: MSISGAAVGS GRNLRRAVEF GKTHVVRPKG KHQATIVWLH GLGDNGSSWS QLLETLPLPN IKWICPTAPS QPISLFGGFP STAWFDVVDI NEDGPDDMEG
101: LDVAAAHVAN LLSNEPADIK LGVGGFSMGA ATSLYSATCF ALGKYGNGNP YPINLSAIIG LSGWLPCAKT LAGKLEEEQI KNRAASLPIV VCHGKADDVV
201: PFKFGEKSSQ ALLSNGFKKV TFKPYSALGH HTIPQELDEL CAWLTSTLSL EG
101: LDVAAAHVAN LLSNEPADIK LGVGGFSMGA ATSLYSATCF ALGKYGNGNP YPINLSAIIG LSGWLPCAKT LAGKLEEEQI KNRAASLPIV VCHGKADDVV
201: PFKFGEKSSQ ALLSNGFKKV TFKPYSALGH HTIPQELDEL CAWLTSTLSL EG
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L9X1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.