Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
- mitochondrion 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G544300.1 | Wheat | plastid | 95.49 | 96.28 |
| TraesCS2A01G543100.1 | Wheat | plastid | 93.85 | 93.85 |
| Zm00001d001902_P001 | Maize | cytosol, plastid | 73.77 | 73.77 |
| Os04t0669600-01 | Rice | mitochondrion, plastid | 70.49 | 73.19 |
| TraesCS2B01G573500.1 | Wheat | cytosol, nucleus, peroxisome | 48.36 | 47.39 |
| TraesCS2B01G572800.1 | Wheat | mitochondrion | 50.0 | 46.39 |
| OQU82541 | Sorghum | plastid | 73.36 | 39.87 |
| TraesCS3B01G249600.2 | Wheat | mitochondrion | 25.41 | 24.6 |
| TraesCS1B01G463000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 25.41 | 24.41 |
| TraesCS3B01G193000.1 | Wheat | extracellular, peroxisome | 12.7 | 24.41 |
| TraesCS3B01G147000.2 | Wheat | plastid | 24.18 | 21.0 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G572900.1 | EnsemblPlantsGene:TraesCS2B01G572900 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF30 | PFAM:PF02230 |
| SEG:seg | SUPFAM:SSF53474 | MapMan:26.8.2.6 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:762506449..762508224
Molecular Weight (calculated)
25628.5 Da
IEP (calculated)
5.499
GRAVY (calculated)
0.193
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPPPAPAA AAAAARAGGL VLWLHGSAET GEHSRGQIAP YFSAGPAVRL SFPTAPIACV GDVVLNAWFG IPEVPITATT VRDEQGVLEA VEHVHEMLDK
101: EVAAGTSPTN IFVCGLSQGG ALAIASVLLY PKTLGGCAVF SGSVPLSKSF ADRVTPEARK TPVLWFHGMA DGVVLFEAGH AGCAFLQELG MACEFKTYLT
201: LGHSLVDEEL QYFRRWIFDR LGISQGTEAA RPSSSSSSNH EDLH
101: EVAAGTSPTN IFVCGLSQGG ALAIASVLLY PKTLGGCAVF SGSVPLSKSF ADRVTPEARK TPVLWFHGMA DGVVLFEAGH AGCAFLQELG MACEFKTYLT
201: LGHSLVDEEL QYFRRWIFDR LGISQGTEAA RPSSSSSSNH EDLH
001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS
Arabidopsis Description
SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.