Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G572900.1 | Wheat | plastid | 96.28 | 95.49 |
| TraesCS2A01G543100.1 | Wheat | plastid | 93.39 | 92.62 |
| Os04t0669600-01 | Rice | mitochondrion, plastid | 71.07 | 73.19 |
| Zm00001d001902_P001 | Maize | cytosol, plastid | 73.55 | 72.95 |
| TraesCS2D01G544600.1 | Wheat | cytosol | 47.93 | 46.4 |
| TraesCS2D01G544200.1 | Wheat | mitochondrion | 50.0 | 46.01 |
| OQU82541 | Sorghum | plastid | 72.31 | 38.98 |
| TraesCS3D01G233300.1 | Wheat | mitochondrion | 25.21 | 24.21 |
| TraesCS1D01G437600.1 | Wheat | plastid | 25.21 | 24.02 |
| TraesCS3D01G128800.2 | Wheat | plastid | 23.55 | 21.35 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G544300.1 | EnsemblPlantsGene:TraesCS2D01G544300 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF30 | PFAM:PF02230 |
| SEG:seg | SUPFAM:SSF53474 | MapMan:26.8.2.6 | : | : | : |
Description
No Description!
Coordinates
chr2D:-:621550631..621552379
Molecular Weight (calculated)
25596.6 Da
IEP (calculated)
5.774
GRAVY (calculated)
0.174
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPPPAPAA AAAARAGGLV LWLHGSAETG EQSRAQIAPY FSAAPAVRLT FPTAPIACVG DVVLNAWFGI PEVPITATTV RDEQGVLEAV EHVHEMLDKE
101: VAAGTSPTNI FVCGLSQGGA LAIASVLLYH KTLGGCAVFS GSVPLSKSFA DRVTPEARKT PVLWFHGMAD GVVLFEAGHA GCAFLQELGM ACEFKTYPTL
201: GHLLVDEELQ YFRRWIFDRL GISQGTKDAR PSSSSSNHED LH
101: VAAGTSPTNI FVCGLSQGGA LAIASVLLYH KTLGGCAVFS GSVPLSKSFA DRVTPEARKT PVLWFHGMAD GVVLFEAGHA GCAFLQELGM ACEFKTYPTL
201: GHLLVDEELQ YFRRWIFDRL GISQGTKDAR PSSSSSNHED LH
001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS
Arabidopsis Description
SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.