Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d001902_P001 | Maize | cytosol, plastid | 48.11 | 88.52 |
| Os04t0669600-01 | Rice | mitochondrion, plastid | 38.75 | 74.04 |
| TraesCS2B01G572900.1 | Wheat | plastid | 39.87 | 73.36 |
| TraesCS2A01G543100.1 | Wheat | plastid | 39.64 | 72.95 |
| TraesCS2D01G544300.1 | Wheat | plastid | 38.98 | 72.31 |
| KXG32884 | Sorghum | plastid | 13.36 | 24.1 |
| KXG31735 | Sorghum | plastid | 13.59 | 23.92 |
| OQU78517 | Sorghum | mitochondrion | 12.69 | 22.44 |
Protein Annotations
| EnsemblPlants:OQU82541 | EnsemblPlantsGene:SORBI_3006G259401 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:AB_hydrolase | InterPro:IPR029058 | InterPro:PLipase/COase/thioEstase | PANTHER:PTHR10655 | PANTHER:PTHR10655:SF30 | PFAM:PF02230 |
| ProteinID:OQU82541 | ProteinID:OQU82541.1 | SEG:seg | SUPFAM:SSF53474 | UniParc:UPI000B8BA1A3 | UniProt:A0A1Z5RGA0 |
| MapMan:26.8.2.6 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:59510394..59515646
Molecular Weight (calculated)
47991.2 Da
IEP (calculated)
5.274
GRAVY (calculated)
0.042
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAERPSA GGFVLWLHGS GGSGDESRQH VAPYFSDPGI VSSVRLSFPT APTRSIPCYG DAVITAWFGI SEVPITAKTV RDEKEVLKAV EYVHELLDKE
101: VAAGTSPSDI FVCGMSQGGA LAIASVLLYP KTLGGCAVFS GSVPLNKSFA EKVSPEATKT PVLWFHGMAD GLVLFEAGHA GCAFLEELGM SCEFKAYPTL
201: GHSLVDEELQ YFQQWILNRL GMAASGATET ARPSSFVLWL HGLGDSGPAN EPIRNLFSAP EFRLAKWSFP SAPRAPVSCN NGFVMPSWFD IHELPMSAGS
301: PQDEAGVLKA VEKVHAMIDR EVADGIHPEN IFVCGFSQGG ALTLASVLLY PKKLGGGAVF SGWVPFGSSV TEKISPEARK TPFLWSHGMA DKVVLFEAGQ
401: AGPPFLQSAG VNCEFKAYPD LGHSLSKEEL LYLESWIKSR LNASQEKDG
101: VAAGTSPSDI FVCGMSQGGA LAIASVLLYP KTLGGCAVFS GSVPLNKSFA EKVSPEATKT PVLWFHGMAD GLVLFEAGHA GCAFLEELGM SCEFKAYPTL
201: GHSLVDEELQ YFQQWILNRL GMAASGATET ARPSSFVLWL HGLGDSGPAN EPIRNLFSAP EFRLAKWSFP SAPRAPVSCN NGFVMPSWFD IHELPMSAGS
301: PQDEAGVLKA VEKVHAMIDR EVADGIHPEN IFVCGFSQGG ALTLASVLLY PKKLGGGAVF SGWVPFGSSV TEKISPEARK TPFLWSHGMA DKVVLFEAGQ
401: AGPPFLQSAG VNCEFKAYPD LGHSLSKEEL LYLESWIKSR LNASQEKDG
001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS
Arabidopsis Description
SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.