CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0175000-03	Rice	plastid	88.63	87.94
GSMUA_Achr2P19690_001	Banana	plastid	78.82	78.21
TraesCS3D01G128800.2	Wheat	plastid	81.57	77.9
TraesCS3A01G127800.1	Wheat	plastid	81.57	73.76
TraesCS3B01G147000.2	Wheat	plastid	80.78	73.31
Zm00001d039653_P005	Maize	extracellular	96.08	70.81
HORVU3Hr1G023960.1	Barley	plastid	88.63	68.69
KXG32884	Sorghum	plastid	64.31	65.86
OQU78517	Sorghum	mitochondrion	64.31	64.57
GSMUA_Achr10P...	Banana	extracellular	64.71	50.93
OQU82541	Sorghum	plastid	23.92	13.59

Protein Annotations

EnsemblPlants:KXG31735	EnsemblPlantsGene:SORBI_3003G048500	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
InterPro:AB_hydrolase	InterPro:IPR029058	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF34	PFAM:PF02230
ProteinID:KXG31735	ProteinID:KXG31735.1	ProteinID:OQU86225.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI00022070C5
UniProt:A0A1B6Q1I8	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:4469847..4473953

Molecular Weight (calculated)

26952.9 Da

IEP (calculated)

6.939

GRAVY (calculated)

-0.082

Length

255 amino acids

Sequence
(BLAST)

001: MSFGGSSSVA SGAKRPFEYG RTHVVRPKGT HKATIVWLHG LGDNGASWSQ LLETLPLPNI KWICPTAPSR PVSVFGGFPS TAWFDVADLS EDAPDDIEGM
101: DASAAHVANL LSTEPADIKL GVGGFSMGAA TALYSATCFA HGKYGNGNPY PVNLSLAVGL SGWLPCARTL KNRIEASPEA AQKASSIPLL LCHGKADDVV
201: LYKHGERSAD ALKANGFSNV LFKSYNSLGH YTVPEEMDEV CKWLTANLAL GTKSS

Best Arabidopsis Sequence Match ( AT5G20060.1 )
(BLAST)

001: MSISGAAVGS GRNLRRAVEF GKTHVVRPKG KHQATIVWLH GLGDNGSSWS QLLETLPLPN IKWICPTAPS QPISLFGGFP STAWFDVVDI NEDGPDDMEG
101: LDVAAAHVAN LLSNEPADIK LGVGGFSMGA ATSLYSATCF ALGKYGNGNP YPINLSAIIG LSGWLPCAKT LAGKLEEEQI KNRAASLPIV VCHGKADDVV
201: PFKFGEKSSQ ALLSNGFKKV TFKPYSALGH HTIPQELDEL CAWLTSTLSL EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L9X1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.