Factsheet for TraesCS2A01G543100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
cytosol 1
mitochondrion 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plasma membrane, plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G572900.1	Wheat	plastid	93.85	93.85
TraesCS2D01G544300.1	Wheat	plastid	92.62	93.39
Os04t0669600-01	Rice	mitochondrion, plastid	71.72	74.47
Zm00001d001902_P001	Maize	cytosol, plastid	71.72	71.72
TraesCS2A01G543000.1	Wheat	mitochondrion	47.95	52.94
TraesCS2A01G543400.1	Wheat	mitochondrion, plastid	40.16	46.45
OQU82541	Sorghum	plastid	72.95	39.64
TraesCS1A01G428100.1	Wheat	plastid	25.41	24.41
TraesCS3A01G219200.1	Wheat	mitochondrion	23.77	23.29
TraesCS3A01G127800.1	Wheat	plastid	23.77	20.57

Protein Annotations

EnsemblPlants:TraesCS2A01G543100.1	EnsemblPlantsGene:TraesCS2A01G543100	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
InterPro:AB_hydrolase	InterPro:IPR029058	InterPro:PLipase/COase/thioEstase	ncoils:Coil	PANTHER:PTHR10655	PANTHER:PTHR10655:SF30
PFAM:PF02230	SEG:seg	SUPFAM:SSF53474	MapMan:26.8.2.6	:	:

Description

No Description!

Coordinates

chr2A:-:753255499..753257122

Molecular Weight (calculated)

25817.9 Da

IEP (calculated)

5.063

GRAVY (calculated)

0.198

Length

244 amino acids

Sequence
(BLAST)

001: MAPPPPAPAA AAAAARAGGL VLWLHGSAET GEQSRGQIAP YFSAAPALRL SFPTAPIACV GDLVLNAWFG IPEIPITATT VRDEEEVLEA VERVHEMLDK
101: EVAAGTCPTN IFVCGLSQGG ALAIASVLLY PKTLGGCAVF SGSVPLSKSF AGRVTPEARK TPVLWFHGMA DGVVLFEAGH AGCAFLQELG MTCEFKTYPT
201: LGHLLVDEEL QYFRRWIFDR LGISQGTEAA RPSSSSLSNH EDLH

Best Arabidopsis Sequence Match ( AT4G22300.1 )
(BLAST)

001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS

Arabidopsis Description

SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.