Factsheet for Os04t0669600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

cytosol 1
mitochondrion 4
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G543100.1	Wheat	plastid	74.47	71.72
Zm00001d001902_P001	Maize	cytosol, plastid	74.47	71.72
TraesCS2D01G544300.1	Wheat	plastid	73.19	71.07
TraesCS2B01G572900.1	Wheat	plastid	73.19	70.49
Os04t0669500-01	Rice	mitochondrion, vacuole	50.21	44.36
OQU82541	Sorghum	plastid	74.04	38.75
Os04t0669700-00	Rice	mitochondrion	15.32	34.62
Os01t0175000-03	Rice	plastid	28.09	25.68
Os01t0612500-01	Rice	plastid	25.53	24.69
Os04t0174900-01	Rice	plastid	25.53	23.62
Os05t0588100-00	Rice	cytosol	20.43	16.9

Protein Annotations

MapMan:26.8.2.6	Gene3D:3.40.50.1820	EntrezGene:4337345	InterPro:AB_hydrolase	EMBL:AK110767	ProteinID:BAF16119.1
ProteinID:BAS91545.1	ProteinID:CAE02817.1	ProteinID:EEE61876.1	GO:GO:0002084	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006629
GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0008474	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0052689	InterPro:IPR029058	EnsemblPlantsGene:Os04g0669600	EnsemblPlants:Os04t0669600-01
PFAM:PF02230	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF30	UniProt:Q0J968	SUPFAM:SSF53474
UniParc:UPI0000DD932F	RefSeq:XP_015635946.1	RefSeq:XP_015635947.1	:	:	:

Description

Phospholipase/carboxylesterase domain containing protein. (Os04t0669600-01)

Coordinates

chr4:-:34150913..34152431

Molecular Weight (calculated)

25070.1 Da

IEP (calculated)

5.051

GRAVY (calculated)

0.159

Length

235 amino acids

Sequence
(BLAST)

001: MGMAAAGGYG RVLWLHGSGQ TGEESRAQVA PYFAAPELAS VRFSFPTAPT SSIPCYGGEV ITAWFAIPEV PITARTARDE KEVLKAVERV HEMLDGEVAA
101: GTSPSNIFVC GLSQGGALAI ASVLLYPMTL GGCVVFSGSL PLSKTFAESI PSEARKTPVL WFHGMADGVV LFEAGHAGCA FLQEIGMHCE FKAYPALGHT
201: LVDEELQYFR QWIKDRLSQG TGVPVPSLSD KMDLQ

Best Arabidopsis Sequence Match ( AT4G22300.1 )
(BLAST)

001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS

Arabidopsis Description

SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.