Factsheet for Solyc06g067950.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073482	Potato	plastid	99.61	99.61
Solyc12g042890.1.1	Tomato	cytosol, nucleus, plastid	87.89	87.55
KRH23541	Soybean	cytosol, mitochondrion, plastid	79.3	79.3
KRH44416	Soybean	mitochondrion	76.95	76.95
CDY72010	Canola	mitochondrion	58.98	75.88
Bra021124.1-P	Field mustard	plastid	74.22	74.51
Bra027221.1-P	Field mustard	mitochondrion	71.88	74.19
CDY20140	Canola	mitochondrion, plastid	73.83	74.12
Bra030973.1-P	Field mustard	cytosol, mitochondrion, plastid	73.44	73.73
CDY30093	Canola	plastid	73.05	73.33
CDY58459	Canola	plastid	73.05	73.33
CDY21856	Canola	plastid	73.05	73.33
CDY02538	Canola	mitochondrion	73.05	73.33
CDX97691	Canola	plastid	73.05	73.33
VIT_09s0002g06010.t01	Wine grape	extracellular	83.59	73.29
AT1G52700.2	Thale cress	cytosol, mitochondrion, nucleus, plastid	72.66	72.94
CDY60557	Canola	plastid	72.27	72.55
GSMUA_Achr6P01610_001	Banana	plastid	71.48	70.93
KRH47496	Soybean	plastid	75.0	70.85
KRH09772	Soybean	plastid	79.69	69.86
Solyc08g067160.2.1	Tomato	plastid	69.53	69.8
Bra001602.1-P	Field mustard	endoplasmic reticulum, extracellular	73.05	69.78
TraesCS1A01G428100.1	Wheat	plastid	69.14	69.69
AT3G15650.2	Thale cress	plastid	74.22	69.34
TraesCS1B01G463000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	68.75	69.29
TraesCS1D01G437600.1	Wheat	plastid	68.75	69.29
CDX75839	Canola	plasma membrane	72.27	69.03
KXG32884	Sorghum	plastid	66.8	68.67
Bra030370.1-P	Field mustard	extracellular	70.31	68.44
Os04t0174900-01	Rice	plastid	67.58	68.11
Zm00001d009726_P002	Maize	mitochondrion	67.58	68.11
Zm00001d044460_P001	Maize	cytosol	65.23	67.89
TraesCS3A01G219200.1	Wheat	mitochondrion	66.02	67.87
OQU78517	Sorghum	mitochondrion	67.19	67.72
Solyc12g006870.1.1	Tomato	plastid	67.19	67.19
TraesCS3D01G233300.1	Wheat	mitochondrion	65.62	66.67
TraesCS3B01G249600.2	Wheat	mitochondrion	65.62	66.67
Os01t0612500-01	Rice	plastid	62.11	65.43
GSMUA_Achr6P01540_001	Banana	mitochondrion	68.75	64.71
CDY62011	Canola	endoplasmic reticulum, plasma membrane	72.27	63.14
HORVU6Hr1G043710.1	Barley	cytosol, extracellular, mitochondrion, plastid	26.56	56.67
HORVU1Hr1G093460.5	Barley	cytosol, plastid	64.45	52.88
Os05t0588100-00	Rice	cytosol	58.59	52.82
HORVU7Hr1G061760.2	Barley	mitochondrion	37.11	45.02
TraesCS3B01G193000.1	Wheat	extracellular, peroxisome	22.27	44.88
Solyc11g012070.1.1	Tomato	extracellular	25.39	25.59

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	GO:GO:0002084	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008474	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0052689	InterPro:IPR029058	UniProt:K4C7X0	PFAM:PF02230	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655
PANTHER:PTHR10655:SF34	SUPFAM:SSF53474	EnsemblPlantsGene:Solyc06g067950.2	EnsemblPlants:Solyc06g067950.2.1	UniParc:UPI000276616A	SEG:seg

Description

No Description!

Coordinates

chr6:+:42119816..42122682

Molecular Weight (calculated)

27716.0 Da

IEP (calculated)

7.780

GRAVY (calculated)

-0.134

Length

256 amino acids

Sequence
(BLAST)

001: MSYLNPSTGS GSRTSRMTFE FGRTYVVRPK GKHQATIVWL HGLGDNGSSW SQLLESLPLP NIKWICPTAP TRPVAILGGF PCTAWFDVGE LSDDGPDDFE
101: GLDASVAHIA NLLSTEPADV KLGIGGFSMG AATALYSATC FAQGKYGNGN TYPVNLRAII GLSGWLPGSR NVRNKIEGSL EAARRASSLP ILLCHGSCDE
201: VVPYKYGERS TLVLNSAGFR NLAFKKYDGL GHYTVPREMD EVCHWLNARL VLEGCR

Best Arabidopsis Sequence Match ( AT1G52700.2 )
(BLAST)

001: MSYSHQSMGS GSRNARGYEF GRTYVVRPKG KHQATLVWLH GLGDNGSSSS QLMDSLHLPN IKWICPTAPS RPVTSLGGFT CTAWFDVGEI SEDGHDDLEG
101: LDASASHIAN LLSSEPADVK VGIGGFSMGA AISLYSATCY ALGRYGTGHA YPINLQAVVG LSGWLPGWKS LRSKIECSFE AARRAASLPI ILTHGTSDDV
201: VPYRFGEKSA QSLGMAGFRL AMFKPYEGLG HYTVPREMDE VVHWLTTMLG LEGSR

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQT5]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.