CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44416	Soybean	mitochondrion	89.84	89.84
KRH09772	Soybean	plastid	97.27	85.27
KRH47496	Soybean	plastid	87.89	83.03
PGSC0003DMT400073482	Potato	plastid	79.3	79.3
Solyc06g067950.2.1	Tomato	plastid	79.3	79.3
Bra027221.1-P	Field mustard	mitochondrion	75.78	78.23
Solyc12g042890.1.1	Tomato	cytosol, nucleus, plastid	78.12	77.82
PGSC0003DMT400073687	Potato	cytosol, nucleus, plastid	78.12	77.82
Bra021124.1-P	Field mustard	plastid	77.34	77.65
CDY20140	Canola	mitochondrion, plastid	76.95	77.25
CDY58459	Canola	plastid	76.95	77.25
CDY72010	Canola	mitochondrion	59.77	76.88
CDX97691	Canola	plastid	76.56	76.86
CDY30093	Canola	plastid	76.17	76.47
CDY21856	Canola	plastid	75.78	76.08
AT1G52700.2	Thale cress	cytosol, mitochondrion, nucleus, plastid	75.78	76.08
Bra030973.1-P	Field mustard	cytosol, mitochondrion, plastid	75.39	75.69
CDY60557	Canola	plastid	75.0	75.29
CDY02538	Canola	mitochondrion	75.0	75.29
CDX75839	Canola	plasma membrane	76.95	73.51
Bra001602.1-P	Field mustard	endoplasmic reticulum, extracellular	76.95	73.51
AT3G15650.2	Thale cress	plastid	76.95	71.9
Bra030370.1-P	Field mustard	extracellular	73.05	71.1
VIT_09s0002g06010.t01	Wine grape	extracellular	80.86	70.89
KRH63025	Soybean	mitochondrion, plastid	70.7	70.16
KRH52472	Soybean	plastid	70.31	69.77
KRH61796	Soybean	plastid	70.31	69.77
GSMUA_Achr6P01610_001	Banana	plastid	69.92	69.38
KXG32884	Sorghum	plastid	67.19	69.08
Zm00001d044460_P001	Maize	cytosol	65.62	68.29
TraesCS1B01G463000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	67.58	68.11
TraesCS1D01G437600.1	Wheat	plastid	67.58	68.11
TraesCS1A01G428100.1	Wheat	plastid	67.19	67.72
OQU78517	Sorghum	mitochondrion	66.02	66.54
Os04t0174900-01	Rice	plastid	66.02	66.54
Zm00001d009726_P002	Maize	mitochondrion	65.62	66.14
TraesCS3A01G219200.1	Wheat	mitochondrion	64.06	65.86
CDY62011	Canola	endoplasmic reticulum, plasma membrane	75.0	65.53
TraesCS3B01G249600.2	Wheat	mitochondrion	64.06	65.08
TraesCS3D01G233300.1	Wheat	mitochondrion	64.06	65.08
Os01t0612500-01	Rice	plastid	60.94	64.2
GSMUA_Achr6P01540_001	Banana	mitochondrion	67.97	63.97
KRH54871	Soybean	mitochondrion	57.42	61.0
KRH54874	Soybean	extracellular	17.97	56.79
HORVU6Hr1G043710.1	Barley	cytosol, extracellular, mitochondrion, plastid	25.78	55.0
Os05t0588100-00	Rice	cytosol	57.42	51.76
HORVU1Hr1G093460.5	Barley	cytosol, plastid	61.72	50.64
TraesCS3B01G193000.1	Wheat	extracellular, peroxisome	24.22	48.82
HORVU7Hr1G061760.2	Barley	mitochondrion	38.28	46.45
KRH02000	Soybean	extracellular, golgi	25.78	26.09
KRH51154	Soybean	cytosol	8.2	22.83

Protein Annotations

EntrezGene:100781212	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	EMBL:ACUP02008474	EnsemblPlantsGene:GLYMA_13G363000
GO:GO:0002084	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008474	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0052689	UniProt:I1M5R2	InterPro:IPR029058
EnsemblPlants:KRH23541	ProteinID:KRH23541	ProteinID:KRH23541.1	ProteinID:KRH23542.1	ProteinID:KRH23543.1	ProteinID:KRH23544.1
ProteinID:KRH23545.1	ProteinID:KRH23546.1	ProteinID:KRH23547.1	PFAM:PF02230	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655
PANTHER:PTHR10655:SF34	MEROPS:S09.A55	SUPFAM:SSF53474	UniParc:UPI000233B6B0	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:+:45000962..45006271

Molecular Weight (calculated)

27625.9 Da

IEP (calculated)

7.887

GRAVY (calculated)

-0.111

Length

256 amino acids

Sequence
(BLAST)

001: MSHAHSHMGS GSRTTRRAFE FGKTHVVRPK GKHQATIVWL HGLGDNGLSS SQLLESLPLP NIKWICPTAP TRPVAILGGF PCTAWFDVGE LSEDGPDDWE
101: GLDTSAAHIA NLLSTEPADV KVGIGGFSMG AAIALYSATC FAMGRYGNGI PYPLNLRTVV GLSGWLPGSR SLRNKIEVSH EARRRAASLP ILLCHGISDD
201: VVLYKYGEKS AQSLCSAGFR YVAFKSYDGL GHYTVPREMD EVCTWFSSRL GLDGSS

Best Arabidopsis Sequence Match ( AT1G52700.2 )
(BLAST)

001: MSYSHQSMGS GSRNARGYEF GRTYVVRPKG KHQATLVWLH GLGDNGSSSS QLMDSLHLPN IKWICPTAPS RPVTSLGGFT CTAWFDVGEI SEDGHDDLEG
101: LDASASHIAN LLSSEPADVK VGIGGFSMGA AISLYSATCY ALGRYGTGHA YPINLQAVVG LSGWLPGWKS LRSKIECSFE AARRAASLPI ILTHGTSDDV
201: VPYRFGEKSA QSLGMAGFRL AMFKPYEGLG HYTVPREMDE VVHWLTTMLG LEGSR

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQT5]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.