CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plastid 4
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51154	Soybean	cytosol	30.83	84.78
GSMUA_Achr1P09700_001	Banana	plastid	68.38	80.47
PGSC0003DMT400034714	Potato	mitochondrion	72.73	72.44
Solyc11g012070.1.1	Tomato	extracellular	72.33	72.05
TraesCS2A01G543000.1	Wheat	mitochondrion	61.26	70.14
VIT_00s0612g00010.t01	Wine grape	cytosol	45.85	67.05
HORVU2Hr1G122470.1	Barley	mitochondrion	64.03	61.6
TraesCS2D01G544200.1	Wheat	mitochondrion	64.03	61.6
TraesCS2B01G572800.1	Wheat	mitochondrion	63.64	61.22
Os04t0669500-01	Rice	mitochondrion, vacuole	62.45	59.4
Zm00001d001903_P003	Maize	extracellular, mitochondrion, plastid	56.92	47.52
VIT_00s0515g00010.t01	Wine grape	cytosol	72.73	38.82
KRH54874	Soybean	extracellular	9.49	29.63
KRH61796	Soybean	plastid	26.88	26.36
KRH63025	Soybean	mitochondrion, plastid	26.48	25.97
KRH52472	Soybean	plastid	26.48	25.97
KRH44416	Soybean	mitochondrion	26.09	25.78
KRH23541	Soybean	cytosol, mitochondrion, plastid	26.09	25.78
KRH47496	Soybean	plastid	26.88	25.09
KRH09772	Soybean	plastid	26.09	22.6
KRH54871	Soybean	mitochondrion	19.76	20.75

Protein Annotations

EntrezGene:100818152	MapMan:26.8.2.6	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EMBL:ACUP02010293	EMBL:BT095897
UniProt:C6TE76	EnsemblPlantsGene:GLYMA_17G009100	GO:GO:0002084	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008474	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	GO:GO:0052689	InterPro:IPR029058	EnsemblPlants:KRH02000	ProteinID:KRH02000	ProteinID:KRH02000.1
PFAM:PF02230	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF20	SUPFAM:SSF53474	TMHMM:TMhelix
UniParc:UPI0001B16A98	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:739369..742912

Molecular Weight (calculated)

27297.9 Da

IEP (calculated)

6.932

GRAVY (calculated)

0.127

Length

253 amino acids

Sequence
(BLAST)

001: MKLIKGSVVL TITITLSSAI LLLLLFPQNQ KPSSSSMSRA RSFVLWLHGL GDSGPANEPI KTLFTSSQFR DTKWSFPSAP SAPVTCNYGS VMPSWFDILE
101: IPVAADSPND ESSLLKAVRN VHATIDKEIA AGINPNNIFI CGFSQGGALT LASVLLYPKT LGGGAVFSGW VPFNSSIIEQ ITPEAKQTPI LWSHGLVDRT
201: VMFEAGQAGP PFLEKIGVGC EFKAYPGLGH TINNEELLYL ESWIKARLQS SSQ

Best Arabidopsis Sequence Match ( AT4G22300.1 )
(BLAST)

001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS

Arabidopsis Description

SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.