CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52472	Soybean	plastid	98.06	98.06
VIT_04s0008g05120.t01	Wine grape	plastid	80.23	80.54
PGSC0003DMT400083903	Potato	plastid	74.81	75.69
Solyc08g067160.2.1	Tomato	plastid	74.81	75.69
KRH63025	Soybean	mitochondrion, plastid	71.71	71.71
KRH23541	Soybean	cytosol, mitochondrion, plastid	69.77	70.31
KRH44416	Soybean	mitochondrion	68.22	68.75
KRH54871	Soybean	mitochondrion	60.08	64.32
KRH47496	Soybean	plastid	66.67	63.47
KRH09772	Soybean	plastid	70.16	61.99
KRH54874	Soybean	extracellular	17.83	56.79
KRH02000	Soybean	extracellular, golgi	26.36	26.88
KRH51154	Soybean	cytosol	9.3	26.09

Protein Annotations

EntrezGene:100811642	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	EMBL:ACUP02002189	EMBL:BT097901
UniProt:C6TJQ1	EnsemblPlantsGene:GLYMA_04G068500	GO:GO:0002084	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008474	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0052689
InterPro:IPR029058	ProteinID:KRH61795.1	EnsemblPlants:KRH61796	ProteinID:KRH61796	ProteinID:KRH61796.1	ProteinID:KRH61797.1
ProteinID:KRH61798.1	PFAM:PF02230	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF34	MEROPS:S09.A56
SUPFAM:SSF53474	UniParc:UPI0001B167E7	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:5723820..5729361

Molecular Weight (calculated)

27784.8 Da

IEP (calculated)

6.993

GRAVY (calculated)

-0.138

Length

258 amino acids

Sequence
(BLAST)

001: MSYSGSSMSS GSGSSRRTFE FGRTHVVRPK GKHQATIVWL HGLGDNGSSW SQLLETLPLP NIKWICPTAP TRPVALFGGF PCTAWFDAGE ISEEAPSDLE
101: GLDASAAHVA NLLSTEPPNI KLGIGGFSMG AATALYSATC HVLGHYGNGN IYPINLSAIV SLSGWLPCSR TLKNQIERSR DGIRRAASLP LFLCHGRGDD
201: VVAYEHGERS AVTLSSSGFQ NLIFRSYNGL GHYTVPEETD EVCRWLTANL GLEGFRLN

Best Arabidopsis Sequence Match ( AT5G20060.1 )
(BLAST)

001: MSISGAAVGS GRNLRRAVEF GKTHVVRPKG KHQATIVWLH GLGDNGSSWS QLLETLPLPN IKWICPTAPS QPISLFGGFP STAWFDVVDI NEDGPDDMEG
101: LDVAAAHVAN LLSNEPADIK LGVGGFSMGA ATSLYSATCF ALGKYGNGNP YPINLSAIIG LSGWLPCAKT LAGKLEEEQI KNRAASLPIV VCHGKADDVV
201: PFKFGEKSSQ ALLSNGFKKV TFKPYSALGH HTIPQELDEL CAWLTSTLSL EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L9X1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.