CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02000	Soybean	extracellular, golgi	84.78	30.83
GSMUA_Achr1P09700_001	Banana	plastid	71.74	30.7
TraesCS2A01G543000.1	Wheat	mitochondrion	59.78	24.89
AT4G22300.1	Thale cress	golgi	69.57	24.43
CDX94090	Canola	extracellular, vacuole	68.48	24.05
Bra019386.1-P	Field mustard	vacuole	67.39	23.85
Bra019385.1-P	Field mustard	cytosol	59.78	23.71
AT4G22305.1	Thale cress	cytosol, plastid	58.7	23.68
CDX94091	Canola	mitochondrion	58.7	22.5
HORVU2Hr1G122470.1	Barley	mitochondrion	63.04	22.05
Os04t0669500-01	Rice	mitochondrion, vacuole	63.04	21.8
TraesCS2D01G544200.1	Wheat	mitochondrion	61.96	21.67
TraesCS2B01G572800.1	Wheat	mitochondrion	61.96	21.67
Zm00001d001903_P003	Maize	extracellular, mitochondrion, plastid	64.13	19.47
CDX98742	Canola	mitochondrion, vacuole	70.65	13.0
KRH61796	Soybean	plastid	26.09	9.3
KRH52472	Soybean	plastid	25.0	8.91
KRH63025	Soybean	mitochondrion, plastid	25.0	8.91
KRH54874	Soybean	extracellular	7.61	8.64
KRH44416	Soybean	mitochondrion	22.83	8.2
KRH23541	Soybean	cytosol, mitochondrion, plastid	22.83	8.2
KRH47496	Soybean	plastid	23.91	8.12
KRH09772	Soybean	plastid	22.83	7.19
KRH54871	Soybean	mitochondrion	18.48	7.05

Protein Annotations

MapMan:26.8.2.6	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EMBL:ACUP02004729	EnsemblPlantsGene:GLYMA_07G264900	GO:GO:0002084
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008474	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0052689	InterPro:IPR029058	UniProt:K7L3Y7	EnsemblPlants:KRH51154
ProteinID:KRH51154	ProteinID:KRH51154.1	PFAM:PF02230	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF20
SUPFAM:SSF53474	UniParc:UPI000295366C	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:43901488..43905849

Molecular Weight (calculated)

10311.2 Da

IEP (calculated)

4.517

GRAVY (calculated)

-0.248

Length

92 amino acids

Sequence
(BLAST)

1: MTKFKWNEDG SVMPSRFDIL EIPVTADSPN DESSLLKAVQ NVHATIDKEI AAGINPNNIF ICGFSQGGHS INNEELRYLE SWIKSLLQIS FQ

Best Arabidopsis Sequence Match ( AT4G22300.1 )
(BLAST)

001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS

Arabidopsis Description

SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.