Factsheet for GSMUA_Achr1P09700_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G543000.1	Wheat	mitochondrion	78.6	76.47
KRH51154	Soybean	cytosol	30.7	71.74
KRH02000	Soybean	extracellular, golgi	80.47	68.38
AT4G22305.1	Thale cress	cytosol, plastid	70.23	66.23
VIT_00s0612g00010.t01	Wine grape	cytosol	53.02	65.9
Solyc11g012070.1.1	Tomato	extracellular	77.21	65.35
PGSC0003DMT400034714	Potato	mitochondrion	76.74	64.96
TraesCS2D01G544200.1	Wheat	mitochondrion	78.6	64.26
TraesCS2B01G572800.1	Wheat	mitochondrion	78.6	64.26
HORVU2Hr1G122470.1	Barley	mitochondrion	78.14	63.88
Os04t0669500-01	Rice	mitochondrion, vacuole	78.14	63.16
AT4G22300.1	Thale cress	golgi	75.81	62.21
CDX94090	Canola	extracellular, vacuole	75.35	61.83
Bra019386.1-P	Field mustard	vacuole	74.42	61.54
Bra019385.1-P	Field mustard	cytosol	64.19	59.48
CDX94091	Canola	mitochondrion	66.05	59.17
Zm00001d001903_P003	Maize	extracellular, mitochondrion, plastid	67.44	47.85
VIT_00s0515g00010.t01	Wine grape	cytosol	82.79	37.55
CDX98742	Canola	mitochondrion, vacuole	74.42	32.0
GSMUA_Achr6P01610_001	Banana	plastid	27.91	23.26
GSMUA_Achr6P01540_001	Banana	mitochondrion	29.3	23.16
GSMUA_Achr2P19690_001	Banana	plastid	27.44	22.96
GSMUA_Achr10P...	Banana	cytosol	9.3	21.74
GSMUA_Achr10P...	Banana	extracellular	23.72	15.74

Protein Annotations

EnsemblPlants:GSMUA_Achr1P09700_001	EnsemblPlants:GSMUA_Achr1T09700_001	EnsemblPlantsGene:GSMUA_Achr1G09700_001	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:AB_hydrolase	InterPro:IPR029058	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF20
PFAM:PF02230	SUPFAM:SSF53474	UniParc:UPI000296CCF5	UniProt:M0RYH9	MapMan:26.8.2.6	:

Description

Putative Acyl-protein thioesterase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G09700_001]

Coordinates

chr1:-:7388224..7393018

Molecular Weight (calculated)

23442.9 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.015

Length

215 amino acids

Sequence
(BLAST)

001: MAARSFVLWL HGLGDSGPAN EPIRTFFSSP EFRLTKWSFP SAPQSPVSCN YGAVMPSWFD IYEIPVTAES PKDENSVLKA VQTVHAMIDK EIANGISPEN
101: IFICGFSQGG ALTLASVLLY PRTLGGGAVF SGWVPFNSSI IARISPEAKK TPILWSHGLA DRTVLFEAGQ AGPPFLEQAG MSCEFKAYPN VGHSIANEEL
201: RYLESWIRTR LKSSS

Best Arabidopsis Sequence Match ( AT4G22300.1 )
(BLAST)

001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS

Arabidopsis Description

SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.