Factsheet for VIT_00s0612g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P09700_001	Banana	plastid	65.9	53.02
TraesCS2A01G543000.1	Wheat	mitochondrion	61.27	47.96
Solyc11g012070.1.1	Tomato	extracellular	68.79	46.85
PGSC0003DMT400034714	Potato	mitochondrion	68.21	46.46
AT4G22305.1	Thale cress	cytosol, plastid	60.69	46.05
KRH02000	Soybean	extracellular, golgi	67.05	45.85
AT4G22300.1	Thale cress	golgi	63.01	41.6
CDX94090	Canola	extracellular, vacuole	61.27	40.46
CDX94091	Canola	mitochondrion	56.07	40.42
Bra019386.1-P	Field mustard	vacuole	60.69	40.38
TraesCS2D01G544200.1	Wheat	mitochondrion	61.27	40.3
HORVU2Hr1G122470.1	Barley	mitochondrion	61.27	40.3
TraesCS2B01G572800.1	Wheat	mitochondrion	61.27	40.3
Bra019385.1-P	Field mustard	cytosol	53.18	39.66
Os04t0669500-01	Rice	mitochondrion, vacuole	59.54	38.72
Zm00001d001903_P003	Maize	extracellular, mitochondrion, plastid	58.96	33.66
VIT_00s0515g00010.t01	Wine grape	cytosol	71.68	26.16
CDX98742	Canola	mitochondrion, vacuole	60.69	21.0
VIT_11s0016g04850.t01	Wine grape	plastid	25.43	17.19
VIT_04s0008g05120.t01	Wine grape	plastid	25.43	17.12
VIT_09s0002g06010.t01	Wine grape	extracellular	25.43	15.07

Protein Annotations

MapMan:26.8.2.6	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	ProteinID:CCB45322	ProteinID:CCB45322.1	UniProt:F6GZD6
EMBL:FN595026	GO:GO:0002084	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008474
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0052689	InterPro:IPR029058
PFAM:PF02230	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF20	SUPFAM:SSF53474	UniParc:UPI0002108C7D
ArrayExpress:VIT_00s0612g00010	EnsemblPlantsGene:VIT_00s0612g00010	EnsemblPlants:VIT_00s0612g00010.t01	:	:	:

Description

No Description!

Coordinates

chrUn:-:32909321..32912653

Molecular Weight (calculated)

18558.1 Da

IEP (calculated)

6.383

GRAVY (calculated)

0.092

Length

173 amino acids

Sequence
(BLAST)

001: MARSFVLWLH GLDDSGPANE HIKALFTSSE FRNTVWSFPS APPIPVTCNN GAITPSWFDI HEIPVTTDST KDENGVLKAV KHVHAMLDKE LAAGTNPNNV
101: FVCGESQGGA LTLASVLLYP RTLGGGAIFS GWVPFNSSII EQIPPGSKKL MTGLTCWGLV VHADTHSVVA WYG

Best Arabidopsis Sequence Match ( AT4G22300.1 )
(BLAST)

001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS

Arabidopsis Description

SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.