Factsheet for VIT_00s0515g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P09700_001	Banana	plastid	37.55	82.79
Solyc11g012070.1.1	Tomato	extracellular	39.45	73.62
PGSC0003DMT400034714	Potato	mitochondrion	39.03	72.83
KRH02000	Soybean	extracellular, golgi	38.82	72.73
TraesCS2A01G543000.1	Wheat	mitochondrion	33.54	71.95
VIT_00s0612g00010.t01	Wine grape	cytosol	26.16	71.68
Bra019386.1-P	Field mustard	vacuole	37.76	68.85
AT4G22300.1	Thale cress	golgi	37.97	68.7
CDX94090	Canola	extracellular, vacuole	37.55	67.94
AT4G22305.1	Thale cress	cytosol, plastid	32.49	67.54
TraesCS2D01G544200.1	Wheat	mitochondrion	35.02	63.12
CDX94091	Canola	mitochondrion	31.86	62.92
HORVU2Hr1G122470.1	Barley	mitochondrion	34.81	62.74
TraesCS2B01G572800.1	Wheat	mitochondrion	34.81	62.74
Bra019385.1-P	Field mustard	cytosol	30.59	62.5
CDX98742	Canola	mitochondrion, vacuole	65.19	61.8
Os04t0669500-01	Rice	mitochondrion, vacuole	34.39	61.28
Zm00001d001903_P003	Maize	extracellular, mitochondrion, plastid	30.38	47.52
VIT_11s0016g04850.t01	Wine grape	plastid	15.4	28.52
VIT_04s0008g05120.t01	Wine grape	plastid	15.19	28.02
VIT_09s0002g06010.t01	Wine grape	extracellular	14.35	23.29

Protein Annotations

EntrezGene:100854352	wikigene:100854352	EntrezGene:100855269	wikigene:100855269	MapMan:26.8.2.6	Gene3D:3.40.50.1820
InterPro:AB_hydrolase	ProteinID:CCB57417	ProteinID:CCB57417.1	UniProt:F6HRV9	EMBL:FN596046	GO:GO:0002084
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008474	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0052689	InterPro:IPR029058	EntrezGene:LOC100854352	wikigene:LOC100854352
EntrezGene:LOC100855269	wikigene:LOC100855269	PFAM:PF02230	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF20
SUPFAM:SSF53474	TIGR:TC55532	TIGR:TC56136	UniParc:UPI00021082E1	ArrayExpress:VIT_00s0515g00010	EnsemblPlantsGene:VIT_00s0515g00010
EnsemblPlants:VIT_00s0515g00010.t01	unigene:Vvi.828	RefSeq:XP_003635387	RefSeq:XP_003635387.1	RefSeq:XP_003635432	RefSeq:XP_003635432.1

Description

No Description!

Coordinates

chrUn:+:31005245..31015399

Molecular Weight (calculated)

51615.7 Da

IEP (calculated)

6.556

GRAVY (calculated)

-0.030

Length

474 amino acids

Sequence
(BLAST)

001: MARSFVLWLH GLDDSGPANE HIKALFTSSE FRNTVWSFPS APPIPVTCNN GAITPSWFDI HEIPVTTDST KDENGVLKAV KHVHAMLDKE LAAGTNANNV
101: FVCGESQGGA LTLASVLLYP RTLGGGAIFS GWVPFNSSII EQIPPGSKKT PILWLHGMAD RTVLFETGQA GQHFLEQAGV SCEFKSYPGL GHSISNEELQ
201: DLESWIITHL QRSLYHHGRT AMDLITVSTK PIALLTITLG STIFFILILR PHTFSPKPDS MARSFVLWLH GLGDSGPANE PIKTLFTSPE FRNTIWKFPS
301: APSNPVTCNY GSVMPSWFDI HEIPVTADSP KDENGVLKAV QNVHAMIDKE LAAGTNPKNI FVCGFSQGGA LTLASVLLYP RTLGGGAVFS GWVPFNSTMI
401: ERMPADAKKT PILWSHGMAD RTVLFEAGQA GPPFLEQAGV SCEFKAYPGL AHSISNEELR YLESWIKTRL QSSS

Best Arabidopsis Sequence Match ( AT4G22300.1 )
(BLAST)

001: MRTSRLKKPI VLLTIALLSS VFFFAFFFLN KSDVSSTSAL RNRDSMARTF ILWLHGLGDS GPANEPIKTL FRSQEFRNTK WLFPSAPPNP VSCNYGAVMP
101: SWFDIPELPL TAGSPKDESS LLKAVKNVHA IIDKEIAGGI NPENVYICGF SQGGALTLAS VLLYPKTIGG GAVFSGWIPF NSSITNQFTE DAKKTPILWS
201: HGIDDKTVLF EAGQAALPFL QQAGVTCEFK AYPGLGHSIS NEELQYLESW LKQRMQSSSS SS

Arabidopsis Description

SOBER1Probable carboxylesterase SOBER1-like [Source:UniProtKB/Swiss-Prot;Acc:Q8GYK2]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.