Factsheet for VIT_11s0016g04850.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63025	Soybean	mitochondrion, plastid	82.03	81.4
Solyc12g006870.1.1	Tomato	plastid	76.95	76.95
AT5G20060.2	Thale cress	plastid	74.61	75.79
VIT_04s0008g05120.t01	Wine grape	plastid	74.22	73.93
KRH54871	Soybean	mitochondrion	66.41	70.54
VIT_09s0002g06010.t01	Wine grape	extracellular	73.44	64.38
GSMUA_Achr10P...	Banana	cytosol	16.8	46.74
VIT_00s0612g00010.t01	Wine grape	cytosol	17.19	25.43
VIT_00s0515g00010.t01	Wine grape	cytosol	28.52	15.4

Protein Annotations

EntrezGene:100257724	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	ProteinID:CBI28159	ProteinID:CBI28159.3
UniProt:D7TBX4	EMBL:FN595756	GO:GO:0002084	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008474	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0052689
InterPro:IPR029058	EntrezGene:LOC100257724	PFAM:PF02230	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF34
SUPFAM:SSF53474	TIGR:TC52039	TIGR:TC55401	UniParc:UPI000198426F	ArrayExpress:VIT_11s0016g04850	EnsemblPlantsGene:VIT_11s0016g04850
EnsemblPlants:VIT_11s0016g04850.t01	unigene:Vvi.2585	RefSeq:XP_010656400.1	:	:	:

Description

No Description!

Coordinates

chr11:+:4157436..4178298

Molecular Weight (calculated)

27454.7 Da

IEP (calculated)

5.335

GRAVY (calculated)

-0.011

Length

256 amino acids

Sequence
(BLAST)

001: MSFTGPSVSG GRTVKRAFEF GRTYVVRPKG KHQATVVWLH GLGDNGSSWF QLLETLPLPN IKWICPTAPT QPISIFGGFP STAWFDVGEL SEDAPDDLEG
101: LDASAAHVAN LLSTEPADIK LGVGGFSMGA AIALYSATCF ALGKYENGNL YPSNLSAVVG LSGWLPCAKT LGNKLERVEE AARRIASLPI LLCHGRGDDV
201: VPFKFGEKSS KALTSAGFRD LMFKEYDGLG HYTIPEEMDE VCSWLTSKLA LEGCSS

Best Arabidopsis Sequence Match ( AT5G20060.1 )
(BLAST)

001: MSISGAAVGS GRNLRRAVEF GKTHVVRPKG KHQATIVWLH GLGDNGSSWS QLLETLPLPN IKWICPTAPS QPISLFGGFP STAWFDVVDI NEDGPDDMEG
101: LDVAAAHVAN LLSNEPADIK LGVGGFSMGA ATSLYSATCF ALGKYGNGNP YPINLSAIIG LSGWLPCAKT LAGKLEEEQI KNRAASLPIV VCHGKADDVV
201: PFKFGEKSSQ ALLSNGFKKV TFKPYSALGH HTIPQELDEL CAWLTSTLSL EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L9X1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.