Factsheet for GSMUA_Achr10P20880_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 2
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, golgi, mitochondrion, nucleus, plasma membrane, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54874	Soybean	extracellular	44.57	50.62
GSMUA_Achr2P19690_001	Banana	plastid	65.22	23.35
Solyc12g006870.1.1	Tomato	plastid	48.91	17.58
AT5G20060.2	Thale cress	plastid	46.74	17.06
GSMUA_Achr6P01610_001	Banana	plastid	47.83	17.05
VIT_11s0016g04850.t01	Wine grape	plastid	46.74	16.8
GSMUA_Achr6P01540_001	Banana	mitochondrion	45.65	15.44
GSMUA_Achr1P09700_001	Banana	plastid	21.74	9.3
GSMUA_Achr10P...	Banana	extracellular	26.09	7.41

Protein Annotations

EnsemblPlants:GSMUA_Achr10P20880_001	EnsemblPlants:GSMUA_Achr10T20880_001	EnsemblPlantsGene:GSMUA_Achr10G20880_001	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:AB_hydrolase	InterPro:IPR029058	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF34
PFAM:PF02230	SUPFAM:SSF53474	UniParc:UPI0002959D4C	UniProt:M0RK13	MapMan:35.2	:

Description

acyl-protein thioesterase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G20880_001]

Coordinates

chr10:+:26745724..26746914

Molecular Weight (calculated)

10151.3 Da

IEP (calculated)

7.069

GRAVY (calculated)

-0.101

Length

92 amino acids

Sequence
(BLAST)

1: MQKTELHLIL MIHPKAAAIL HSGIPNVYPS SPRDDVVLYK HGEKSSQVLK SVGFENVTFK TYNGLGHYTV PGEMEDVCKF LVTTLGLDGS YS

Best Arabidopsis Sequence Match ( AT1G52700.5 )
(BLAST)

001: MDSLHLPNIK WICPTAPSRP VTSLGGFTCT AWFDVGEISE DGHDDLEGLD ASASHIANLL SSEPADVKVG IGGFSMGAAI SLYSATCYAL GRYGTGHAYP
101: INLQAVVGLS GWLPGWKSLR SKIECSFEAA RRAASLPIIL THGTSDDVVP YRFGEKSAQS LGMAGFRLAM FKPYEGLGHY TVPREMDEVV HWLTTMLGLE
201: GSR

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQT5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.