CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54871	Soybean	mitochondrion	79.07	84.65
VIT_11s0016g04850.t01	Wine grape	plastid	81.4	82.03
KRH54874	Soybean	extracellular	25.19	80.25
Solyc12g006870.1.1	Tomato	plastid	76.36	76.95
AT5G20060.2	Thale cress	plastid	74.81	76.59
KRH52472	Soybean	plastid	71.71	71.71
KRH61796	Soybean	plastid	71.71	71.71
KRH23541	Soybean	cytosol, mitochondrion, plastid	70.16	70.7
KRH44416	Soybean	mitochondrion	68.6	69.14
KRH47496	Soybean	plastid	67.05	63.84
KRH09772	Soybean	plastid	70.93	62.67
KRH02000	Soybean	extracellular, golgi	25.97	26.48
KRH51154	Soybean	cytosol	8.91	25.0

Protein Annotations

EntrezGene:100796190	Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	EMBL:ACUP02002568	EMBL:ACUP02002569
EMBL:BT097138	UniProt:C6THL5	EnsemblPlantsGene:GLYMA_04G149900	GO:GO:0002084	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008474	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0052689	InterPro:IPR029058	ProteinID:KRH63023.1	ProteinID:KRH63024.1	EnsemblPlants:KRH63025	ProteinID:KRH63025
ProteinID:KRH63025.1	ProteinID:KRH63026.1	PFAM:PF02230	InterPro:PLipase/COase/thioEstase	PANTHER:PTHR10655	PANTHER:PTHR10655:SF34
MEROPS:S09.A56	SUPFAM:SSF53474	UniParc:UPI0001B166FD	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:32603728..32617798

Molecular Weight (calculated)

27345.3 Da

IEP (calculated)

6.007

GRAVY (calculated)

-0.079

Length

258 amino acids

Sequence
(BLAST)

001: MSFAAPSLGS AGGRSARRAF EFGRTYVVRP KGKHQATIVW LHGLGDNGSS WSQLLETLPL PNIKWICPTA PTQPISIFGG FPSTAWFDVG DISEDAPDDL
101: EGLDASAAHV ANLLSTEPAD IKLGVGGFSM GAATALYSVS CFTAGKYGNG NPYPANLSAA VGLSGWLPCS KTLSNKLQGV DEATRRAQSF PVLLCHGKVD
201: DVVPYKFGEK SSKCLSSTGF QDVTFKAYNG LGHYTIPEEM DEVCAWLTSK LSLEGNTV

Best Arabidopsis Sequence Match ( AT5G20060.1 )
(BLAST)

001: MSISGAAVGS GRNLRRAVEF GKTHVVRPKG KHQATIVWLH GLGDNGSSWS QLLETLPLPN IKWICPTAPS QPISLFGGFP STAWFDVVDI NEDGPDDMEG
101: LDVAAAHVAN LLSNEPADIK LGVGGFSMGA ATSLYSATCF ALGKYGNGNP YPINLSAIIG LSGWLPCAKT LAGKLEEEQI KNRAASLPIV VCHGKADDVV
201: PFKFGEKSSQ ALLSNGFKKV TFKPYSALGH HTIPQELDEL CAWLTSTLSL EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L9X1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.