Factsheet for PGSC0003DMT400083903

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g067160.2.1	Tomato	plastid	99.22	99.22
VIT_04s0008g05120.t01	Wine grape	plastid	78.43	77.82
KRH52472	Soybean	plastid	75.69	74.81
KRH61796	Soybean	plastid	75.69	74.81
PGSC0003DMT400073482	Potato	plastid	69.41	69.14
PGSC0003DMT400073687	Potato	cytosol, nucleus, plastid	67.84	67.32
PGSC0003DMT400034714	Potato	mitochondrion	23.14	23.23

Protein Annotations

EnsemblPlants:PGSC0003DMT400083903	EnsemblPlantsGene:PGSC0003DMG400033649	EntrezGene:102593417	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:AB_hydrolase	InterPro:IPR029058	InterPro:PLipase/COase/thioEstase	MEROPS:S09.A56	PANTHER:PTHR10655
PANTHER:PTHR10655:SF34	PFAM:PF02230	PGSC:PGSC0003DMG400033649	RefSeq:XP_006361514.1	RefSeq:XP_006361515.1	RefSeq:XP_015170798.1
SEG:seg	SUPFAM:SSF53474	UniParc:UPI000296D68F	UniProt:M1D7B6	MapMan:35.1	:

Description

Acyl-protein thioesterase [Source:PGSC_GENE;Acc:PGSC0003DMG400033649]

Coordinates

chr8:+:40510845..40514964

Molecular Weight (calculated)

27157.0 Da

IEP (calculated)

6.700

GRAVY (calculated)

-0.085

Length

255 amino acids

Sequence
(BLAST)

001: MSFSGSTAGS GSGTTRTSLE FGRTHVVRPK GKHEATIVWL HGLGDKGSSW SQLLESFPLP NVKWICPTAP TRPVAAFGGF PCTAWFDVGD ISEDAPDDLE
101: GLDFSAAHVA NLLSTEPADV KLCVGGFSMG AATALYSATC HAFSQYGNGS PYRVNLSAVV GLSGWLPCSR TLRRRMQGVN DAVRRAASLP ILLCHGTGDD
201: VVAYQHGEKS ARILSSSGFQ NLTLRTYEGL GHYTIPEETD EICRWLSANL CLGGT

Best Arabidopsis Sequence Match ( AT5G20060.1 )
(BLAST)

001: MSISGAAVGS GRNLRRAVEF GKTHVVRPKG KHQATIVWLH GLGDNGSSWS QLLETLPLPN IKWICPTAPS QPISLFGGFP STAWFDVVDI NEDGPDDMEG
101: LDVAAAHVAN LLSNEPADIK LGVGGFSMGA ATSLYSATCF ALGKYGNGNP YPINLSAIIG LSGWLPCAKT LAGKLEEEQI KNRAASLPIV VCHGKADDVV
201: PFKFGEKSSQ ALLSNGFKKV TFKPYSALGH HTIPQELDEL CAWLTSTLSL EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L9X1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.