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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 5
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400083903 Potato plastid 99.22 99.22
VIT_04s0008g05120.t01 Wine grape plastid 78.43 77.82
KRH52472 Soybean plastid 75.69 74.81
KRH61796 Soybean plastid 75.69 74.81
Solyc06g067950.2.1 Tomato plastid 69.8 69.53
Solyc12g042890.1.1 Tomato cytosol, nucleus, plastid 68.24 67.7
Solyc12g006870.1.1 Tomato plastid 66.67 66.41
Solyc11g012070.1.1 Tomato extracellular 24.31 24.41
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.1InterPro:AB_hydrolaseGO:GO:0002084GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006464GO:GO:0008150
GO:GO:0008152GO:GO:0008474GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0019538
GO:GO:0052689InterPro:IPR029058UniProt:K4CLU2PFAM:PF02230InterPro:PLipase/COase/thioEstasePANTHER:PTHR10655
PANTHER:PTHR10655:SF34MEROPS:S09.A56SUPFAM:SSF53474EnsemblPlantsGene:Solyc08g067160.2EnsemblPlants:Solyc08g067160.2.1UniParc:UPI000276C0A2
SEG:seg:::::
Description
No Description!
Coordinates
chr8:+:56116762..56120675
Molecular Weight (calculated)
27207.1 Da
IEP (calculated)
6.697
GRAVY (calculated)
-0.076
Length
255 amino acids
Sequence
(BLAST)
001: MSFSGSTAGS GSGTTRTSLE FGRTHVVRPK GKHEATIVWL HGLGDKGSSW SQLLESFPLP NVKWICPTAP TRPVAAFGGF PCTAWFDVGD ISEDAPDDLE
101: GLDFSAAHVA NLLSTEPADV KLCVGGFSMG AATALYSATC HAFSQYGNGS PYRVNLCAVV GLSGWLPCSR TLRRRMQGVN DAVRRAASLP ILLCHGTGDD
201: VVAYQHGEKS ARILSSSGFQ NLTFRTYEGL GHYTIPEETD EICRWLSANL CLGGT
Best Arabidopsis Sequence Match ( AT5G20060.1 )
(BLAST)
001: MSISGAAVGS GRNLRRAVEF GKTHVVRPKG KHQATIVWLH GLGDNGSSWS QLLETLPLPN IKWICPTAPS QPISLFGGFP STAWFDVVDI NEDGPDDMEG
101: LDVAAAHVAN LLSNEPADIK LGVGGFSMGA ATSLYSATCF ALGKYGNGNP YPINLSAIIG LSGWLPCAKT LAGKLEEEQI KNRAASLPIV VCHGKADDVV
201: PFKFGEKSSQ ALLSNGFKKV TFKPYSALGH HTIPQELDEL CAWLTSTLSL EG
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L9X1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.