Factsheet for Bra030380.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027035.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G52510.1	Bra027035.1-P	AT1G62560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49911	Canola	plastid	100.0	100.0
CDX87912	Canola	plastid	96.01	96.01
AT1G52510.1	Thale cress	plastid	87.77	86.84
HORVU2Hr1G114720.10	Barley	cytosol	64.36	73.33
PGSC0003DMT400073443	Potato	plastid	72.07	70.76
KRH47425	Soybean	plastid	70.21	70.59
KRH44482	Soybean	nucleus	70.48	70.48
Solyc06g068220.2.1	Tomato	plastid	71.54	70.23
VIT_09s0002g07500.t01	Wine grape	plastid	69.95	68.67
Os04t0644600-01	Rice	plastid	67.29	64.54
TraesCS2A01G517900.3	Wheat	plastid	65.43	62.44
TraesCS2B01G546500.2	Wheat	plastid	66.49	62.34
TraesCS2D01G519500.2	Wheat	plastid	65.69	61.9
KRH55620	Soybean	cytosol	18.88	60.68
KXG27241	Sorghum	plastid	64.89	60.55
Zm00001d026437_P001	Maize	plastid	44.95	57.88
Bra032674.1-P	Field mustard	plastid	27.66	26.46

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	EnsemblPlantsGene:Bra030380	EnsemblPlants:Bra030380.1
EnsemblPlants:Bra030380.1-P	InterPro:Epox_hydrolase-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009941
InterPro:Hydrolase_4	InterPro:IPR029058	UniProt:M4ENL0	PFAM:PF12146	PRINTS:PR00111	PRINTS:PR00412
PANTHER:PTHR43194	SUPFAM:SSF53474	UniParc:UPI000254780A	SEG:seg	:	:

Description

AT1G52510 (E=5e-196) | hydrolase, alpha/beta fold family protein

Coordinates

chrA05:+:10734529..10736387

Molecular Weight (calculated)

41607.4 Da

IEP (calculated)

8.177

GRAVY (calculated)

-0.299

Length

376 amino acids

Sequence
(BLAST)

001: MPLSLLSPLP LLHSFSPTKS SASRIRATPS RLRLSVVKAT SEKGSSGNVP EDDPSFNPFG FVTDNPSSRS AIQLPESPAE DGNVGQMLYR TEDKGREFGS
101: TIKSGKLRWF VRETGSKESR RGTVVFLHGA PTQSFSYRTV MSEMSEFGFH CYAPDWIGFG FSDKPQPGYG FNYTEKEYHE AFDKLLDTLE IKSPFFLVVQ
201: GFLVGSYGLT WALKNPSKIE KIAILNTPLT VSSPVPGLFK QLRIPLFGEF TCQNAILAER FIEGGSPYVL KNEKADVYRL PYLSSGGPGF ALLETAKKIN
301: FGDTLGQIAN GFSSGSWDKP TLLAWGIADK YLSQSIAEEF EKQNPQNVKL RLIEGAGHLP QEDWPEKVVA ALRSFF

Best Arabidopsis Sequence Match ( AT1G52510.1 )
(BLAST)

001: MSLLSPLPLL HSFSSTVATK STASRITATP SKIRFSVINA TSENGNSGGS KNDRDEDPSF NPFGFVTDNP SSRSAIQLPE SPAEDGNVGQ MLYRTEDKGK
101: EYGSTIKSGK LRWFVRETGS KESRRGTIVF VHGAPTQSFS YRTVMSELSD AGFHCFAPDW IGFGFSDKPQ PGYGFNYTEK EYHEAFDKLL EVLEVKSPFF
201: LVVQGFLVGS YGLTWALKNP SKVEKLAILN SPLTVSSPVP GLFKQLRIPL FGEFTCQNAI LAERFIEGGS PYVLKNEKAD VYRLPYLSSG GPGFALLETA
301: KKINFGDTLS QIANGFSSGS WDKPTLLAWG IADKYLPQSI AEEFEKQNPQ NVKLRLIEGA GHLPQEDWPE KVVAALRAFF

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ57]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.