Factsheet for HORVU2Hr1G114720.10

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G053900.1
HORVU1Hr1G091130.12
HORVU2Hr1G026400.29
HORVU4Hr1G031220.3
HORVU4Hr1G087900.7
HORVU6Hr1G029800.7
HORVU6Hr1G061340.1
HORVU6Hr1G094480.7
HORVU7Hr1G027520.8

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G52510.1	HORVU1Hr1G053900.1	AT1G62560.1	21798944
AT1G52510.1	HORVU1Hr1G091130.12	AT1G62560.1	21798944
AT1G52510.1	HORVU2Hr1G026400.29	AT1G62560.1	21798944
AT1G52510.1	HORVU4Hr1G031220.3	AT1G62560.1	21798944
AT1G52510.1	HORVU4Hr1G087900.7	AT1G62560.1	21798944
AT1G52510.1	HORVU6Hr1G029800.7	AT1G62560.1	21798944
AT1G52510.1	HORVU6Hr1G061340.1	AT1G62560.1	21798944
AT1G52510.1	HORVU6Hr1G094480.7	AT1G62560.1	21798944
AT1G52510.1	HORVU7Hr1G027520.8	AT1G62560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G517900.3	Wheat	plastid	93.33	78.17
TraesCS2D01G519500.2	Wheat	plastid	94.24	77.94
TraesCS2B01G546500.2	Wheat	plastid	93.64	77.06
KXG27241	Sorghum	plastid	83.64	68.49
Os04t0644600-01	Rice	plastid	80.3	67.6
Bra030380.1-P	Field mustard	plastid	73.33	64.36
CDY49911	Canola	plastid	73.33	64.36
AT1G52510.1	Thale cress	plastid	73.94	64.21
CDX87912	Canola	plastid	73.03	64.1
PGSC0003DMT400073443	Potato	plastid	73.03	62.92
KRH47425	Soybean	plastid	70.61	62.3
KRH44482	Soybean	nucleus	70.91	62.23
Solyc06g068220.2.1	Tomato	plastid	72.12	62.14
VIT_09s0002g07500.t01	Wine grape	plastid	72.12	62.14
Zm00001d026437_P001	Maize	plastid	53.64	60.62
KRH55620	Soybean	cytosol	19.7	55.56
HORVU3Hr1G093990.1	Barley	cytosol, mitochondrion, plastid	27.27	21.79

Protein Annotations

EnsemblPlants:HORVU2Hr1G114720.10	EnsemblPlantsGene:HORVU2Hr1G114720	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR43194	PFAM:PF12697	PRINTS:PR00111	SUPFAM:SSF53474	UniParc:UPI000B4774B6	UniProt:A0A287JIP0
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:732729892..732734069

Molecular Weight (calculated)

36545.4 Da

IEP (calculated)

6.057

GRAVY (calculated)

-0.232

Length

330 amino acids

Sequence
(BLAST)

001: GDPAFNPFGF VTDNPSSRSA IQLPASPAQD GNVGQMLYRT EDKGREYGKS VRSGEFRWFV RQTGSPDSRR GTIMFLHGAP TQSFSYRTVM AQMADAGYHC
101: FAPDWLGFGF SEMPQPGYGF DFKEEEFHKA FDELLVTLNI TEPFFLVVQG FLVGSYGLTW ALKNSNKLLK IAILNSPLTV SSPVPGVFKQ LRFPLLGEFT
201: CQNAILAERF IEAGSPYVLK SEKADVYRLP YLSSGAPGFA LLETARKANF QDVLSRISAG FSSNSSWDKP ILLAWGESDK YLPLSIAEEF KKNNPSVVKL
301: KPIEGAGHMP QEDWAREGGD GPEFLPVLVH

Best Arabidopsis Sequence Match ( AT1G52510.1 )
(BLAST)

001: MSLLSPLPLL HSFSSTVATK STASRITATP SKIRFSVINA TSENGNSGGS KNDRDEDPSF NPFGFVTDNP SSRSAIQLPE SPAEDGNVGQ MLYRTEDKGK
101: EYGSTIKSGK LRWFVRETGS KESRRGTIVF VHGAPTQSFS YRTVMSELSD AGFHCFAPDW IGFGFSDKPQ PGYGFNYTEK EYHEAFDKLL EVLEVKSPFF
201: LVVQGFLVGS YGLTWALKNP SKVEKLAILN SPLTVSSPVP GLFKQLRIPL FGEFTCQNAI LAERFIEGGS PYVLKNEKAD VYRLPYLSSG GPGFALLETA
301: KKINFGDTLS QIANGFSSGS WDKPTLLAWG IADKYLPQSI AEEFEKQNPQ NVKLRLIEGA GHLPQEDWPE KVVAALRAFF

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ57]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.