Factsheet for Zm00001d026437_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d027286_P001
Zm00001d029865_P001
Zm00001d046637_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G52510.1	Zm00001d027286_P001	AT1G62560.1	21798944
AT1G52510.1	Zm00001d029865_P001	AT1G62560.1	21798944
AT1G52510.1	Zm00001d046637_P001	AT1G62560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG27241	Sorghum	plastid	83.56	60.55
HORVU2Hr1G114720.10	Barley	cytosol	60.62	53.64
TraesCS2A01G517900.3	Wheat	plastid	69.18	51.27
TraesCS2B01G546500.2	Wheat	plastid	69.86	50.87
TraesCS2D01G519500.2	Wheat	plastid	69.18	50.63
Os04t0644600-01	Rice	plastid	67.81	50.51
KRH55620	Soybean	cytosol	20.21	50.43
AT1G52510.1	Thale cress	plastid	58.9	45.26
PGSC0003DMT400073443	Potato	plastid	59.25	45.17
Bra030380.1-P	Field mustard	plastid	57.88	44.95
CDY49911	Canola	plastid	57.88	44.95
CDX87912	Canola	plastid	57.19	44.41
VIT_09s0002g07500.t01	Wine grape	plastid	58.22	44.39
Solyc06g068220.2.1	Tomato	plastid	57.88	44.13
KRH44482	Soybean	nucleus	55.82	43.35
KRH47425	Soybean	plastid	55.48	43.32
Zm00001d042346_P001	Maize	plastid	15.75	19.49

Protein Annotations

EnsemblPlants:Zm00001d026437_P001	EnsemblPlants:Zm00001d026437_T001	EnsemblPlantsGene:Zm00001d026437	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:AB_hydrolase	InterPro:IPR029058	PANTHER:PTHR43194	ProteinID:AQK46593.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0008437E20	UniProt:A0A1D6JFP3	MapMan:35.2	:	:

Description

alpha/beta-Hydrolases superfamily protein

Coordinates

chr10:-:145821443..145826784

Molecular Weight (calculated)

30605.4 Da

IEP (calculated)

7.210

GRAVY (calculated)

-0.023

Length

292 amino acids

Sequence
(BLAST)

001: MSHCCPCASA SSSTAPFFLP SIPDSSSCRS GSGGAFSAAV GRSKLRCGGG PRRGQATVAA GSKDGGSGGT AGGEKGEDDA PAFNPFGFVT DNPSSRSAIQ
101: LPAVPAEDGN VGQMLYGFLV GSYGLTWALN NSSKVLKLAI LNSPLTVSSP VPGLFQQLKW PLFGEFTCQN AVLAERFIEA GSAYMLKLEK ADVYRLPYLS
201: SGAPGFALLE AARKINFQDV LSRISAGFSS NGWEKPILLA WGISDKYLPL SIAEEFKQAN PGVVKLEAIE GAGHMPQEDW PEKVVKALTS FL

Best Arabidopsis Sequence Match ( AT1G52510.1 )
(BLAST)

001: MSLLSPLPLL HSFSSTVATK STASRITATP SKIRFSVINA TSENGNSGGS KNDRDEDPSF NPFGFVTDNP SSRSAIQLPE SPAEDGNVGQ MLYRTEDKGK
101: EYGSTIKSGK LRWFVRETGS KESRRGTIVF VHGAPTQSFS YRTVMSELSD AGFHCFAPDW IGFGFSDKPQ PGYGFNYTEK EYHEAFDKLL EVLEVKSPFF
201: LVVQGFLVGS YGLTWALKNP SKVEKLAILN SPLTVSSPVP GLFKQLRIPL FGEFTCQNAI LAERFIEGGS PYVLKNEKAD VYRLPYLSSG GPGFALLETA
301: KKINFGDTLS QIANGFSSGS WDKPTLLAWG IADKYLPQSI AEEFEKQNPQ NVKLRLIEGA GHLPQEDWPE KVVAALRAFF

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ57]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.