CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91959
KXG40414
OQU92170

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G52510.1	EER91959	AT1G62560.1	21798944
AT1G52510.1	KXG40414	AT1G62560.1	21798944
AT1G52510.1	OQU92170	AT1G62560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G114720.10	Barley	cytosol	68.49	83.64
Zm00001d026437_P001	Maize	plastid	60.55	83.56
TraesCS2A01G517900.3	Wheat	plastid	73.45	75.13
TraesCS2D01G519500.2	Wheat	plastid	73.95	74.69
TraesCS2B01G546500.2	Wheat	plastid	73.95	74.31
Os04t0644600-01	Rice	plastid	70.47	72.45
PGSC0003DMT400073443	Potato	plastid	62.53	65.8
VIT_09s0002g07500.t01	Wine grape	plastid	62.28	65.54
CDX87912	Canola	plastid	61.04	65.43
AT1G52510.1	Thale cress	plastid	61.29	65.0
Bra030380.1-P	Field mustard	plastid	60.55	64.89
CDY49911	Canola	plastid	60.55	64.89
Solyc06g068220.2.1	Tomato	plastid	61.54	64.75
KRH47425	Soybean	plastid	59.8	64.44
KRH44482	Soybean	nucleus	59.55	63.83
KRH55620	Soybean	cytosol	14.89	51.28
OQU88111	Sorghum	cytosol	24.07	22.56

Protein Annotations

EnsemblPlants:KXG27241	EnsemblPlantsGene:SORBI_3006G238200	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	InterPro:AB_hydrolase
InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43194	PFAM:PF12697	PRINTS:PR00111
PRINTS:PR00412	ProteinID:KXG27241	ProteinID:KXG27241.1	SEG:seg	SUPFAM:SSF53474	unigene:Sbi.18024
UniParc:UPI00081AC918	UniProt:A0A1B6PNK3	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:57914671..57919585

Molecular Weight (calculated)

43549.7 Da

IEP (calculated)

5.994

GRAVY (calculated)

-0.100

Length

403 amino acids

Sequence
(BLAST)

001: MSRCCPCASA ASTTAPFLLP SIPAASSRSG GGGGAFFSAA VGRSRLRCGG GPRHGHAMVA AGSKDNGSGT AEGEKGEDDA PAFNPFGFVT DNPSSRSAIQ
101: LPAVPAEDGN VGQMLYRIED KGREYGSYVR AGEFRWFVRE TGSPDARRGT IVFLHGAPAQ SFSYRVVMAQ MADAGYHCYA PDWIGFGFSE MPQPGYGFDF
201: KEDEFHKAFD DLLGTLNITE PFFLVVQGFL VGSYGLTWAL NNSSKVLKLA ILNSPLTVSS PVPGLFQQLK WPLLGEFTCQ NAVLAERFIE AGSAYMLKLE
301: KADVYRLPYL SSGAPGFALL ETARKIDFQD VQSRISAGFS SNGWEKPILL AWGISDKYLP LSIAEEFKKA NPSVVKLEAI EGAGHMPQED WPEKVVKALI
401: YFL

Best Arabidopsis Sequence Match ( AT1G52510.1 )
(BLAST)

001: MSLLSPLPLL HSFSSTVATK STASRITATP SKIRFSVINA TSENGNSGGS KNDRDEDPSF NPFGFVTDNP SSRSAIQLPE SPAEDGNVGQ MLYRTEDKGK
101: EYGSTIKSGK LRWFVRETGS KESRRGTIVF VHGAPTQSFS YRTVMSELSD AGFHCFAPDW IGFGFSDKPQ PGYGFNYTEK EYHEAFDKLL EVLEVKSPFF
201: LVVQGFLVGS YGLTWALKNP SKVEKLAILN SPLTVSSPVP GLFKQLRIPL FGEFTCQNAI LAERFIEGGS PYVLKNEKAD VYRLPYLSSG GPGFALLETA
301: KKINFGDTLS QIANGFSSGS WDKPTLLAWG IADKYLPQSI AEEFEKQNPQ NVKLRLIEGA GHLPQEDWPE KVVAALRAFF

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ57]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.