CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042346_P001	Maize	plastid	52.79	96.19
Os01t0919700-01	Rice	mitochondrion	71.63	81.27
TraesCS3D01G421500.1	Wheat	mitochondrion	67.67	77.39
TraesCS3A01G426600.1	Wheat	mitochondrion	66.98	76.6
HORVU3Hr1G093990.1	Barley	cytosol, mitochondrion, plastid	68.14	70.94
TraesCS3B01G462800.1	Wheat	plastid	67.21	68.32
GSMUA_Achr10P...	Banana	plastid	55.12	62.53
VIT_07s0151g00860.t01	Wine grape	plastid	56.98	60.95
Solyc09g047900.1.1	Tomato	plastid	54.19	60.68
Bra032674.1-P	Field mustard	plastid	53.26	58.27
CDY39712	Canola	plastid	53.26	58.27
CDY60486	Canola	plastid	52.56	57.51
AT4G12830.1	Thale cress	plastid	52.56	57.51
KRH66302	Soybean	plastid	56.51	54.85
PGSC0003DMT400075010	Potato	plastid	6.74	30.85
KXG27241	Sorghum	plastid	22.56	24.07
KRG88518	Soybean	extracellular, plastid	3.95	11.97

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.2	UniProt:A0A1W0W178	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:IPR029058
EnsemblPlants:OQU88111	ProteinID:OQU88111	ProteinID:OQU88111.1	ProteinID:OQU88112.1	PFAM:PF00561	PRINTS:PR00111
PANTHER:PTHR43329	PANTHER:PTHR43329:SF26	EnsemblPlantsGene:SORBI_3003G403800	SUPFAM:SSF53474	UniParc:UPI0009DC8DD4	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:71160746..71168118

Molecular Weight (calculated)

48105.1 Da

IEP (calculated)

8.406

GRAVY (calculated)

-0.432

Length

430 amino acids

Sequence
(BLAST)

001: MPLTDSPQRK LWREAREPTK PYLRFASSAP PSKTPLESGP SWQHHAPPMG PQLAAVGPAI TAPRFRTTLP CCTRPRSRRL TSWRRAALPK DEDYYLIDAE
101: ESIGDGFSFS GGKYGEGPSK SDEWFAQGKM VNAYQIYGDK GKAKDPFFGL TMGSESQSSD DVFRWFCVEA GSSSNPKVLL IHGLPSQAYS YRNVMPVLSD
201: KYHAIAFDWL GFGFSDKPQP KYGFDYTLDE YASSLESLVN AVAPDKLSIV VQGYFAPVAV KYASEHQDKL NHLVLVNPPI TDKHVNLPST LASFSNFLLG
301: EIFSQDPLRA SDKVLTSCGP YLMKEEDAMV YRRPYLVSGS SGFALNAISK AMKKDLKAYI ESMRNILRSN SWKTKTTVCW GMRDRWLSYD GVEDFFGGLN
401: QKIVELPMAG HHVQEDRGEE LGNMIKSILR

Best Arabidopsis Sequence Match ( AT4G12830.1 )
(BLAST)

001: MAVHIHNPNF FHTHHLRASL TSASASPSSY LFHRHSASKY PSFLCKSNNK DDYLIDAPVS VGDGFSFSGG KYSDQPSPSD EWLKQGKWVK AHRVGGSGVE
101: AKDPIFGLTM GASSQASKDL FRWFSVESGS VDSPPVILIH GFPSQAYSYR KTIPVLSKNY RAIAFDWLGF GFSDKPQAGY GFNYTMDEFV SSLESFIDEV
201: TTSKVSLVVQ GYFSAAVVKY ARNRPDKIKN LILLNPPLTP EHAKLPSTLS VFSNFLLGEI FSQDPLRASD KPLTSCGPYK MKEDDAMVYR RPYLTSGSSG
301: FALNAISRSM KKELKKYAEE MRTSLMDKNW KIPITVCWGQ RDRWLSYEGV EEFCKSSGHN LVELPNAGHH VQEDCGEELG GIISRIISKS ALF

Arabidopsis Description

AT4g12830/T20K18_180 [Source:UniProtKB/TrEMBL;Acc:Q93ZN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.