Factsheet for TraesCS3B01G462800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G421500.1	Wheat	mitochondrion	86.52	97.34
TraesCS3A01G426600.1	Wheat	mitochondrion	86.52	97.34
HORVU3Hr1G093990.1	Barley	cytosol, mitochondrion, plastid	87.71	89.83
Zm00001d042346_P001	Maize	plastid	46.81	83.9
Os01t0919700-01	Rice	mitochondrion	70.69	78.89
OQU88111	Sorghum	cytosol	68.32	67.21
GSMUA_Achr10P...	Banana	plastid	53.9	60.16
VIT_07s0151g00860.t01	Wine grape	plastid	56.03	58.96
CDY39712	Canola	plastid	53.9	58.02
Bra032674.1-P	Field mustard	plastid	53.9	58.02
Solyc09g047900.1.1	Tomato	plastid	52.01	57.29
CDY60486	Canola	plastid	52.72	56.74
AT4G12830.1	Thale cress	plastid	52.48	56.49
KRH66302	Soybean	plastid	56.5	53.95
PGSC0003DMT400075010	Potato	plastid	6.86	30.85
TraesCS2B01G546500.2	Wheat	plastid	22.93	24.19
KRG88518	Soybean	extracellular, plastid	3.55	10.56

Protein Annotations

EnsemblPlants:TraesCS3B01G462800.1	EnsemblPlantsGene:TraesCS3B01G462800	Gene3D:3.40.50.1820	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR43329	PANTHER:PTHR43329:SF26	PFAM:PF00561	PRINTS:PR00111	SEG:seg	SUPFAM:SSF53474
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:705699031..705703751

Molecular Weight (calculated)

46678.3 Da

IEP (calculated)

7.101

GRAVY (calculated)

-0.409

Length

423 amino acids

Sequence
(BLAST)

001: MTAVGTVAGG AGGHEPTKPY PLQAPPRSPS KTPTESDSPW HPPRQPPMAP PLAAPRFHAA LPRGLLLRPR KPLPTWRRAA RPDDQDLYVD DDIGDGFSFS
101: GGKYAEAEGP SKSDEWFAQG RMVKAHALYG NKEKAKDPFF GLTMGSGSQS SGDVFNWFCA EAGSSSNPTV LLIHGFPSQA YSYRNVLPVL ADKYRCIAFD
201: WLGFGFSDKP QPKYGFDYTL DEYTSALESL IDAVAPDKLS IVVQGYFAPI VVKYAKEHQD KLNHLILVNP PITDKHAKLP STLACFSNFL LGEVFSQDPL
301: RASDKALTSS GPYMMKEEDA TVYRRPYLVS GASGFALNAI TRAMEKDLKA YIESMRSILA SDSWNTKTTI CWGLRDRWLT YDGVEDFCDG LKHNVVQLPM
401: AGHHAQEDRG EELGNIIKRI LRG

Best Arabidopsis Sequence Match ( AT4G12830.1 )
(BLAST)

001: MAVHIHNPNF FHTHHLRASL TSASASPSSY LFHRHSASKY PSFLCKSNNK DDYLIDAPVS VGDGFSFSGG KYSDQPSPSD EWLKQGKWVK AHRVGGSGVE
101: AKDPIFGLTM GASSQASKDL FRWFSVESGS VDSPPVILIH GFPSQAYSYR KTIPVLSKNY RAIAFDWLGF GFSDKPQAGY GFNYTMDEFV SSLESFIDEV
201: TTSKVSLVVQ GYFSAAVVKY ARNRPDKIKN LILLNPPLTP EHAKLPSTLS VFSNFLLGEI FSQDPLRASD KPLTSCGPYK MKEDDAMVYR RPYLTSGSSG
301: FALNAISRSM KKELKKYAEE MRTSLMDKNW KIPITVCWGQ RDRWLSYEGV EEFCKSSGHN LVELPNAGHH VQEDCGEELG GIISRIISKS ALF

Arabidopsis Description

AT4g12830/T20K18_180 [Source:UniProtKB/TrEMBL;Acc:Q93ZN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.