Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032674.1-P | Field mustard | plastid | 89.82 | 89.82 |
| CDY39712 | Canola | plastid | 89.82 | 89.82 |
| CDY60486 | Canola | plastid | 89.06 | 89.06 |
| Zm00001d042346_P001 | Maize | plastid | 40.46 | 67.37 |
| VIT_07s0151g00860.t01 | Wine grape | plastid | 67.18 | 65.67 |
| Solyc09g047900.1.1 | Tomato | plastid | 63.36 | 64.84 |
| Os01t0919700-01 | Rice | mitochondrion | 60.56 | 62.8 |
| KRH66302 | Soybean | plastid | 67.94 | 60.27 |
| TraesCS3D01G421500.1 | Wheat | mitochondrion | 56.49 | 59.04 |
| TraesCS3A01G426600.1 | Wheat | mitochondrion | 55.98 | 58.51 |
| GSMUA_Achr10P... | Banana | plastid | 55.47 | 57.52 |
| HORVU3Hr1G093990.1 | Barley | cytosol, mitochondrion, plastid | 56.23 | 53.51 |
| OQU88111 | Sorghum | cytosol | 57.51 | 52.56 |
| TraesCS3B01G462800.1 | Wheat | plastid | 56.49 | 52.48 |
| PGSC0003DMT400075010 | Potato | plastid | 10.18 | 42.55 |
| AT1G52510.1 | Thale cress | plastid | 25.7 | 26.58 |
| KRG88518 | Soybean | extracellular, plastid | 4.07 | 11.27 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:826895 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | ProteinID:AEE83190.1 |
| ArrayExpress:AT4G12830 | EnsemblPlantsGene:AT4G12830 | RefSeq:AT4G12830 | TAIR:AT4G12830 | RefSeq:AT4G12830-TAIR-G | EnsemblPlants:AT4G12830.1 |
| TAIR:AT4G12830.1 | EMBL:AY056437 | EMBL:AY090325 | Unigene:At.3098 | InterPro:Epox_hydrolase-like | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0016787 | InterPro:IPR029058 | RefSeq:NP_567394.1 | PFAM:PF00561 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 |
| PRINTS:PR00111 | PRINTS:PR00412 | PANTHER:PTHR43329 | PANTHER:PTHR43329:SF26 | UniProt:Q93ZN4 | SUPFAM:SSF53474 |
| UniParc:UPI00000A5B2B | SEG:seg | : | : | : | : |
Description
AT4g12830/T20K18_180 [Source:UniProtKB/TrEMBL;Acc:Q93ZN4]
Coordinates
chr4:+:7531141..7533587
Molecular Weight (calculated)
43764.8 Da
IEP (calculated)
8.629
GRAVY (calculated)
-0.338
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVHIHNPNF FHTHHLRASL TSASASPSSY LFHRHSASKY PSFLCKSNNK DDYLIDAPVS VGDGFSFSGG KYSDQPSPSD EWLKQGKWVK AHRVGGSGVE
101: AKDPIFGLTM GASSQASKDL FRWFSVESGS VDSPPVILIH GFPSQAYSYR KTIPVLSKNY RAIAFDWLGF GFSDKPQAGY GFNYTMDEFV SSLESFIDEV
201: TTSKVSLVVQ GYFSAAVVKY ARNRPDKIKN LILLNPPLTP EHAKLPSTLS VFSNFLLGEI FSQDPLRASD KPLTSCGPYK MKEDDAMVYR RPYLTSGSSG
301: FALNAISRSM KKELKKYAEE MRTSLMDKNW KIPITVCWGQ RDRWLSYEGV EEFCKSSGHN LVELPNAGHH VQEDCGEELG GIISRIISKS ALF
101: AKDPIFGLTM GASSQASKDL FRWFSVESGS VDSPPVILIH GFPSQAYSYR KTIPVLSKNY RAIAFDWLGF GFSDKPQAGY GFNYTMDEFV SSLESFIDEV
201: TTSKVSLVVQ GYFSAAVVKY ARNRPDKIKN LILLNPPLTP EHAKLPSTLS VFSNFLLGEI FSQDPLRASD KPLTSCGPYK MKEDDAMVYR RPYLTSGSSG
301: FALNAISRSM KKELKKYAEE MRTSLMDKNW KIPITVCWGQ RDRWLSYEGV EEFCKSSGHN LVELPNAGHH VQEDCGEELG GIISRIISKS ALF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.