CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

nucleus 1
plastid 2
extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66302	Soybean	plastid	50.7	16.25
Zm00001d042346_P001	Maize	plastid	9.86	5.93
GSMUA_Achr10P...	Banana	plastid	15.49	5.8
Os01t0919700-01	Rice	mitochondrion	13.38	5.01
VIT_07s0151g00860.t01	Wine grape	plastid	13.38	4.73
Solyc09g047900.1.1	Tomato	plastid	12.68	4.69
HORVU3Hr1G093990.1	Barley	cytosol, mitochondrion, plastid	13.38	4.6
CDY39712	Canola	plastid	11.97	4.33
Bra032674.1-P	Field mustard	plastid	11.97	4.33
TraesCS3D01G421500.1	Wheat	mitochondrion	11.27	4.26
TraesCS3A01G426600.1	Wheat	mitochondrion	11.27	4.26
CDY60486	Canola	plastid	11.27	4.07
AT4G12830.1	Thale cress	plastid	11.27	4.07
KRH44482	Soybean	nucleus	10.56	3.99
OQU88111	Sorghum	cytosol	11.97	3.95
KRH47425	Soybean	plastid	9.86	3.74
TraesCS3B01G462800.1	Wheat	plastid	10.56	3.55
KRH55620	Soybean	cytosol	2.82	3.42
PGSC0003DMT400075010	Potato	plastid	0.7	1.06

Protein Annotations

EnsemblPlants:KRG88518	EnsemblPlantsGene:GLYMA_U022200	EntrezGene:106797947	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	ProteinID:KRG88518	ProteinID:KRG88518.1	SEG:seg
UniParc:UPI0006EDB403	UniProt:A0A0R0E3Q7	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chrscaffold_211:-:37538..38400

Molecular Weight (calculated)

15429.3 Da

IEP (calculated)

9.430

GRAVY (calculated)

-0.306

Length

142 amino acids

Sequence
(BLAST)

001: MDKTKHVSFL CCFGIKTNGL SVKLLSRSFP LNQNQPLHVI IAMTLQAFHG SACCFRSHLL HFSSSTASSP PFLASRRFQS CPSTRKSLKL NCSSSGNNGD
101: QDYLLDAPVS VGDGFSFSGG KYSDGPSPSD EWFKQGKKVT TN

Best Arabidopsis Sequence Match ( AT4G12830.1 )
(BLAST)

001: MAVHIHNPNF FHTHHLRASL TSASASPSSY LFHRHSASKY PSFLCKSNNK DDYLIDAPVS VGDGFSFSGG KYSDQPSPSD EWLKQGKWVK AHRVGGSGVE
101: AKDPIFGLTM GASSQASKDL FRWFSVESGS VDSPPVILIH GFPSQAYSYR KTIPVLSKNY RAIAFDWLGF GFSDKPQAGY GFNYTMDEFV SSLESFIDEV
201: TTSKVSLVVQ GYFSAAVVKY ARNRPDKIKN LILLNPPLTP EHAKLPSTLS VFSNFLLGEI FSQDPLRASD KPLTSCGPYK MKEDDAMVYR RPYLTSGSSG
301: FALNAISRSM KKELKKYAEE MRTSLMDKNW KIPITVCWGQ RDRWLSYEGV EEFCKSSGHN LVELPNAGHH VQEDCGEELG GIISRIISKS ALF

Arabidopsis Description

AT4g12830/T20K18_180 [Source:UniProtKB/TrEMBL;Acc:Q93ZN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.