Factsheet for Bra032674.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39712	Canola	plastid	100.0	100.0
AT4G12830.1	Thale cress	plastid	89.82	89.82
Zm00001d042346_P001	Maize	plastid	40.97	68.22
Solyc09g047900.1.1	Tomato	plastid	64.89	66.41
VIT_07s0151g00860.t01	Wine grape	plastid	66.41	64.93
Os01t0919700-01	Rice	mitochondrion	61.32	63.59
KRH66302	Soybean	plastid	68.45	60.72
TraesCS3D01G421500.1	Wheat	mitochondrion	58.02	60.64
TraesCS3A01G426600.1	Wheat	mitochondrion	57.51	60.11
GSMUA_Achr10P...	Banana	plastid	55.98	58.05
HORVU3Hr1G093990.1	Barley	cytosol, mitochondrion, plastid	57.76	54.96
TraesCS3B01G462800.1	Wheat	plastid	58.02	53.9
OQU88111	Sorghum	cytosol	58.27	53.26
PGSC0003DMT400075010	Potato	plastid	10.18	42.55
Bra030380.1-P	Field mustard	plastid	26.46	27.66
KRG88518	Soybean	extracellular, plastid	4.33	11.97

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	EnsemblPlantsGene:Bra032674	EnsemblPlants:Bra032674.1
EnsemblPlants:Bra032674.1-P	InterPro:Epox_hydrolase-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:IPR029058	UniProt:M4EV41
PFAM:PF00561	PRINTS:PR00111	PRINTS:PR00412	PANTHER:PTHR43329	PANTHER:PTHR43329:SF26	SUPFAM:SSF53474
UniParc:UPI000254400B	SEG:seg	:	:	:	:

Description

AT4G12830 (E=6e-208) | hydrolase, alpha/beta fold family protein

Coordinates

chrA04:-:5702953..5704897

Molecular Weight (calculated)

43604.6 Da

IEP (calculated)

8.128

GRAVY (calculated)

-0.368

Length

393 amino acids

Sequence
(BLAST)

001: MAVHIHNPNF LHTHQLRSSL TSASASPASY HFTRYSPAKH PGFICKSNNK DDYLIDAPVS AGDGFSFSGG KYSDQPSPSD EWLKQGKWVK AHRVGGSGEE
101: AKDPIFGLTM GSSSQASKDV FRWFCVESGK VDSPPVILIH GFPSQAYSYR KALPVLSKNY RAIAFDWLGF GFSDKPQAGY GFNYTLDEYV SSLESFIDEV
201: TTTQVSLVVQ GYFSTAAVKY ARNRPEKIKN LILLNPPLTP EHAKLPSTLS VFSNFLLGEI FSQDPLRASD KPLTSCGPYK MKEDDAMVYR RPYLTSGSSG
301: FALNAISRAM KKELKGYTEE MRSSLMDKDW KIPTTVCWGQ RDKWLSYQGV EEFCKSSGHN LVELPMAGHH VQEDCGEEIG GLISRIISKA ALI

Best Arabidopsis Sequence Match ( AT4G12830.1 )
(BLAST)

001: MAVHIHNPNF FHTHHLRASL TSASASPSSY LFHRHSASKY PSFLCKSNNK DDYLIDAPVS VGDGFSFSGG KYSDQPSPSD EWLKQGKWVK AHRVGGSGVE
101: AKDPIFGLTM GASSQASKDL FRWFSVESGS VDSPPVILIH GFPSQAYSYR KTIPVLSKNY RAIAFDWLGF GFSDKPQAGY GFNYTMDEFV SSLESFIDEV
201: TTSKVSLVVQ GYFSAAVVKY ARNRPDKIKN LILLNPPLTP EHAKLPSTLS VFSNFLLGEI FSQDPLRASD KPLTSCGPYK MKEDDAMVYR RPYLTSGSSG
301: FALNAISRSM KKELKKYAEE MRTSLMDKNW KIPITVCWGQ RDRWLSYEGV EEFCKSSGHN LVELPNAGHH VQEDCGEELG GIISRIISKS ALF

Arabidopsis Description

AT4g12830/T20K18_180 [Source:UniProtKB/TrEMBL;Acc:Q93ZN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.