Factsheet for Solyc09g047900.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042346_P001	Maize	plastid	41.41	67.37
Bra032674.1-P	Field mustard	plastid	66.41	64.89
CDY39712	Canola	plastid	66.41	64.89
CDY60486	Canola	plastid	65.89	64.38
VIT_07s0151g00860.t01	Wine grape	plastid	67.19	64.18
AT4G12830.1	Thale cress	plastid	64.84	63.36
Os01t0919700-01	Rice	mitochondrion	61.98	62.8
KRH66302	Soybean	plastid	68.49	59.37
GSMUA_Achr10P...	Banana	plastid	57.55	58.31
TraesCS3D01G421500.1	Wheat	mitochondrion	57.03	58.24
TraesCS3A01G426600.1	Wheat	mitochondrion	56.51	57.71
PGSC0003DMT400075010	Potato	plastid	13.28	54.26
OQU88111	Sorghum	cytosol	60.68	54.19
HORVU3Hr1G093990.1	Barley	cytosol, mitochondrion, plastid	57.29	53.27
TraesCS3B01G462800.1	Wheat	plastid	57.29	52.01
Solyc06g068220.2.1	Tomato	plastid	26.82	26.89
KRG88518	Soybean	extracellular, plastid	4.69	12.68

Protein Annotations

EnsemblPlants:Solyc09g047900.1.1	EnsemblPlantsGene:Solyc09g047900.1	Gene3D:3.40.50.1820	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR43329	PANTHER:PTHR43329:SF26	PFAM:PF00561	PRINTS:PR00111	SEG:seg	SUPFAM:SSF53474
UniParc:UPI000276AD29	UniProt:K4CSY9	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr9:+:33689158..33695213

Molecular Weight (calculated)

42661.5 Da

IEP (calculated)

6.598

GRAVY (calculated)

-0.281

Length

384 amino acids

Sequence
(BLAST)

001: MATLHSCSFS SLHSFPSVTL KYSRTQPRIL RFNCRSSSDD KEDYLLDAPV SVGDGFSFSG GKYSDEPSPA DEWFDRGKFV KAYPVSGTGE KAKDPIFGLT
101: MGESSQASSD LFRWFCVESG SSNNSPILLI HGLPSQAYSY RKVLPMLENN YHAIALDWLG FGFSDKPQPK YGFDYTLDEY VASLESVINA LTDKKVTLVV
201: QGYFSAIAIK YASNHQEKLN GLILLNPPLT INHAKLPSSL SVLSNFLLGE IFCQDPLRAS DKTLQSCGPY QIKEDVAMVY RRPYLTSGSA GFALNAISKA
301: MKKQLKGYVE DTRAILMDNN WSVQTTVCWG QRDRWLSFDG VEDFCKESKH RLVELPMSGH HVQEDSGEEL GQLIAGIVGK RSSL

Best Arabidopsis Sequence Match ( AT4G12830.1 )
(BLAST)

001: MAVHIHNPNF FHTHHLRASL TSASASPSSY LFHRHSASKY PSFLCKSNNK DDYLIDAPVS VGDGFSFSGG KYSDQPSPSD EWLKQGKWVK AHRVGGSGVE
101: AKDPIFGLTM GASSQASKDL FRWFSVESGS VDSPPVILIH GFPSQAYSYR KTIPVLSKNY RAIAFDWLGF GFSDKPQAGY GFNYTMDEFV SSLESFIDEV
201: TTSKVSLVVQ GYFSAAVVKY ARNRPDKIKN LILLNPPLTP EHAKLPSTLS VFSNFLLGEI FSQDPLRASD KPLTSCGPYK MKEDDAMVYR RPYLTSGSSG
301: FALNAISRSM KKELKKYAEE MRTSLMDKNW KIPITVCWGQ RDRWLSYEGV EEFCKSSGHN LVELPNAGHH VQEDCGEELG GIISRIISKS ALF

Arabidopsis Description

AT4g12830/T20K18_180 [Source:UniProtKB/TrEMBL;Acc:Q93ZN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.