CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0151g00860.t01	Wine grape	plastid	64.79	71.39
Zm00001d042346_P001	Maize	plastid	37.02	69.49
Solyc09g047900.1.1	Tomato	plastid	59.37	68.49
Bra032674.1-P	Field mustard	plastid	60.72	68.45
CDY39712	Canola	plastid	60.72	68.45
AT4G12830.1	Thale cress	plastid	60.27	67.94
CDY60486	Canola	plastid	60.05	67.68
Os01t0919700-01	Rice	mitochondrion	55.53	64.91
TraesCS3D01G421500.1	Wheat	mitochondrion	54.4	64.1
TraesCS3A01G426600.1	Wheat	mitochondrion	54.18	63.83
GSMUA_Achr10P...	Banana	plastid	54.4	63.59
HORVU3Hr1G093990.1	Barley	cytosol, mitochondrion, plastid	54.4	58.35
OQU88111	Sorghum	cytosol	54.85	56.51
TraesCS3B01G462800.1	Wheat	plastid	53.95	56.5
KRG88518	Soybean	extracellular, plastid	16.25	50.7
PGSC0003DMT400075010	Potato	plastid	8.8	41.49
KRH44482	Soybean	nucleus	25.28	29.79
KRH47425	Soybean	plastid	25.06	29.68
KRH55620	Soybean	cytosol	7.67	29.06

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	EMBL:ACUP02001936	InterPro:Epox_hydrolase-like
EnsemblPlantsGene:GLYMA_03G097300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	UniProt:I1JME3	InterPro:IPR029058	EnsemblPlants:KRH66302
ProteinID:KRH66302	ProteinID:KRH66302.1	PFAM:PF00561	PRINTS:PR00111	PRINTS:PR00412	PANTHER:PTHR43329
PANTHER:PTHR43329:SF26	SUPFAM:SSF53474	UniParc:UPI00029694CE	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:28481904..28489392

Molecular Weight (calculated)

49224.6 Da

IEP (calculated)

8.803

GRAVY (calculated)

-0.309

Length

443 amino acids

Sequence
(BLAST)

001: MDKTKRVSFL CCFGIKTNGL SVKLLSRSFP LNQNQPLHVI IAMTLQAFHG SACCFRSHLL HFSSSTASSP PFLASRRFQS CPSTRKSLKL NCSSSGNNGD
101: QDYLLDAPVS VGDGFSFSGG KYSDGPSPSD EWFKQGKKVK AYSIPGTGEK AKDPIFGLAM GSGSQATGDR FRWFCVESGS ADNPSVILIH GFPSQAYSYR
201: KVLPVLSKDY HVIAFDWLGF GFSDKPQPRY GFDYTLDEYV SSLESLIDEL AATKVSLVVQ GYFSPVVAKY ASIHQEKVRN LILLNPPLTA QHAKLPPTLS
301: IFSNFLLGEI FSQDPLRASD KALTSCGPYK MKEEDAMVYR RPYLTSGSSG FALNAISRNM NKDLKRYVED MQTILKDKNW KVQTTICWGQ RDRWLSYDGV
401: EDFCKDSNHK LIDVPTAGHH VQEDCGEEVG QLIRGIISKR TKI

Best Arabidopsis Sequence Match ( AT4G12830.1 )
(BLAST)

001: MAVHIHNPNF FHTHHLRASL TSASASPSSY LFHRHSASKY PSFLCKSNNK DDYLIDAPVS VGDGFSFSGG KYSDQPSPSD EWLKQGKWVK AHRVGGSGVE
101: AKDPIFGLTM GASSQASKDL FRWFSVESGS VDSPPVILIH GFPSQAYSYR KTIPVLSKNY RAIAFDWLGF GFSDKPQAGY GFNYTMDEFV SSLESFIDEV
201: TTSKVSLVVQ GYFSAAVVKY ARNRPDKIKN LILLNPPLTP EHAKLPSTLS VFSNFLLGEI FSQDPLRASD KPLTSCGPYK MKEDDAMVYR RPYLTSGSSG
301: FALNAISRSM KKELKKYAEE MRTSLMDKNW KIPITVCWGQ RDRWLSYEGV EEFCKSSGHN LVELPNAGHH VQEDCGEELG GIISRIISKS ALF

Arabidopsis Description

AT4g12830/T20K18_180 [Source:UniProtKB/TrEMBL;Acc:Q93ZN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.